Oncoscape tumor cohorts
13 multi-omics public cohorts ingested from Oncoscape — 14,132 samples across 3 cbioportal, 6 csv_light, 3 synthetic_ccle, 1 holland_custom formats. Each cohort drills into its sample list, and each sample links to its Hallmark GSVA preview plus the pathway-reversal scorer.
Adrenocortical Carcinoma (TCGA PanCancer Atlas 2018)
cbioportal · v2018 · 92 samples
libraries: hallmark
Bladder Landscape
csv_light · v3 · 1,368 samples
libraries: custom_bladder-landscape, hallmark, kegg, reactome
Brain UMAP
csv_light · v2 · 3,188 samples
libraries: custom_brain-umap, hallmark, kegg, reactome
Breast Landscapes
csv_light · v18 · 2,284 samples
libraries: custom_breast-umap, hallmark, kegg, reactome
CCLE — Acute Myeloid Leukemia (cell lines)
synthetic_ccle · vv2024.1 · 38 samples
libraries: hallmark
CCLE — Chronic Myelogenous Leukemia (cell lines)
synthetic_ccle · vv2024.1 · 14 samples
libraries: hallmark
CCLE — Hepatocellular Carcinoma (cell lines)
synthetic_ccle · vv2024.1 · 22 samples
libraries: hallmark
Colon Landscapes
csv_light · v1 · 931 samples
libraries: custom_colon-landscapes, hallmark, kegg, reactome
Head and Neck
csv_light · v1 · 675 samples
libraries: custom_head-neck, hallmark, kegg, reactome
Lung Landscapes
csv_light · v6 · 1,824 samples
libraries: custom_lung-landscapes, hallmark, kegg, reactome
Medulloblastoma/EPN UMAP
holland_custom · vdate-based · 1,358 samples
libraries: custom_medullo-epn-umap, hallmark, kegg, reactome
Melanoma UMAP
cbioportal · v29 · 1,040 samples
libraries: custom_melanoma-umap, hallmark, kegg, reactome
Meningioma UMAP
cbioportal · v100 · 1,298 samples
libraries: custom_mng-umap, hallmark, kegg, reactome