SRR934784
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
- overall_survival_months
- 31.274638633377133
- age_years
- 43
- sex
- Male
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- ANGIOGENESIS+0.527
- EPITHELIAL_MESENCHYMAL_TRANSITION+0.455
- IL6_JAK_STAT3_SIGNALING+0.424
- COAGULATION+0.421
- TNFA_SIGNALING_VIA_NFKB+0.399
- HYPOXIA+0.357
- INFLAMMATORY_RESPONSE+0.348
- ALLOGRAFT_REJECTION+0.346
- COMPLEMENT+0.244
- INTERFERON_GAMMA_RESPONSE+0.236
Top 10 suppressed
- OXIDATIVE_PHOSPHORYLATION-0.531
- FATTY_ACID_METABOLISM-0.282
- DNA_REPAIR-0.278
- PEROXISOME-0.273
- ADIPOGENESIS-0.257
- MYC_TARGETS_V1-0.246
- CHOLESTEROL_HOMEOSTASIS-0.239
- HEDGEHOG_SIGNALING-0.220
- UV_RESPONSE_UP-0.210
- MYOGENESIS-0.206
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
9 twins match this tumor's tissue · 1 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SRR934781 | — | — | 0.935 |
| 2 | SRR934785 | — | — | 0.921 |
| 3 | SRR934801 | — | — | 0.886 |
| 4 | SRR934794 | — | — | 0.843 |
| 5 | C3N-02192 | — | cohortMD2 | 0.825 |
| 6 | SRR934979 | — | — | 0.822 |
| 7 | C3L-03462 | — | cohortA1 | 0.811 |
| 8 | SRR818270 | GTEX | — | 0.811 |
| 9 | SRR934739 | — | — | 0.806 |
| 10 | SRR934966 | — | — | 0.805 |