SRR650183
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
- sex
- Male
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- G2M_CHECKPOINT+0.500
- E2F_TARGETS+0.480
- TGF_BETA_SIGNALING+0.450
- MITOTIC_SPINDLE+0.420
- MYC_TARGETS_V1+0.390
- MYC_TARGETS_V2+0.380
- NOTCH_SIGNALING+0.360
- UNFOLDED_PROTEIN_RESPONSE+0.330
- ANGIOGENESIS+0.320
- PI3K_AKT_MTOR_SIGNALING+0.300
Top 10 suppressed
- PANCREAS_BETA_CELLS-0.480
- BILE_ACID_METABOLISM-0.340
- XENOBIOTIC_METABOLISM-0.280
- SPERMATOGENESIS-0.190
- MYOGENESIS-0.160
- FATTY_ACID_METABOLISM-0.150
- COAGULATION-0.120
- KRAS_SIGNALING_DN-0.110
- KRAS_SIGNALING_UP-0.110
- HEDGEHOG_SIGNALING-0.100
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SRR934861 | — | — | 0.885 |
| 2 | SRR934813 | — | — | 0.871 |
| 3 | A21476BD-0550-4D87-80EA-6E1454E0896D | — | — | 0.852 |
| 4 | 50DE1FDE-B85E-4677-B0F8-08275DA41A6E | — | — | 0.852 |
| 5 | 6A30D8D0-DDB8-4B34-8BCB-46986144F551 | — | — | 0.852 |
| 6 | 39777F3A-0854-4C8E-9FF4-9A1369C4733D | — | — | 0.850 |
| 7 | TCGA-GD-A3OQ-01A-32R-A220-07 | — | — | 0.849 |
| 8 | F226F6D3-DE88-4B15-A0F1-63EDB55E8F9D | — | — | 0.849 |
| 9 | SRR650195 | — | — | 0.846 |
| 10 | D717EAB5-3C67-4EF0-99BF-3416278BE492 | — | — | 0.844 |