TCGA-AN-A0AR-01A-11R-A00Z-07
— · E
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- E
- subtype
- E
- overall_survival_months
- 0
- os_event
- false
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- MYC_TARGETS_V2+0.530
- E2F_TARGETS+0.420
- MYC_TARGETS_V1+0.360
- G2M_CHECKPOINT+0.270
- SPERMATOGENESIS+0.220
- KRAS_SIGNALING_DN+0.130
- OXIDATIVE_PHOSPHORYLATION+0.100
- DNA_REPAIR+0.080
- WNT_BETA_CATENIN_SIGNALING+0.070
- MTORC1_SIGNALING+0.060
Top 10 suppressed
- INTERFERON_ALPHA_RESPONSE-0.650
- INTERFERON_GAMMA_RESPONSE-0.600
- TGF_BETA_SIGNALING-0.580
- TNFA_SIGNALING_VIA_NFKB-0.500
- INFLAMMATORY_RESPONSE-0.470
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.450
- IL6_JAK_STAT3_SIGNALING-0.440
- PROTEIN_SECRETION-0.440
- APOPTOSIS-0.400
- ALLOGRAFT_REJECTION-0.380
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
9 twins match this tumor's tissue · 1 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | TCGA-77-A5G7-01B-11R-A27Q-07 | — | cohortSQ1 | 0.940 |
| 2 | TCGA-QK-A8Z7-01A-11R-A39I-07 | — | — | 0.938 |
| 3 | SRR5088911 | — | — | 0.936 |
| 4 | TCGA-NC-A5HR-01A-21R-A26W-07 | — | cohortSQ2 | 0.935 |
| 5 | C3L-01285 | — | cohortSQ2 | 0.932 |
| 6 | C3N-02283 | — | cohortMD1 | 0.932 |
| 7 | BS_3V3KE3VT | medulloblastoma | — | 0.927 |
| 8 | TCGA-37-A5EN-01A-21R-A26W-07 | — | cohortSQ2 | 0.923 |
| 9 | SRR2932822 | — | — | 0.922 |
| 10 | TCGA-85-8352-01A-31R-2326-07 | — | cohortMD1 | 0.921 |