TCGA-D8-A1JC-01A-11R-A13Q-07
— · B
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- B
- subtype
- B
- overall_survival_months
- 16
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- INTERFERON_ALPHA_RESPONSE+0.520
- INTERFERON_GAMMA_RESPONSE+0.420
- PROTEIN_SECRETION+0.400
- MITOTIC_SPINDLE+0.380
- G2M_CHECKPOINT+0.370
- E2F_TARGETS+0.330
- TGF_BETA_SIGNALING+0.310
- ANDROGEN_RESPONSE+0.280
- MTORC1_SIGNALING+0.260
- PI3K_AKT_MTOR_SIGNALING+0.170
Top 10 suppressed
- REACTIVE_OXYGEN_SPECIES_PATHWAY-0.340
- PANCREAS_BETA_CELLS-0.270
- MYC_TARGETS_V2-0.240
- TNFA_SIGNALING_VIA_NFKB-0.200
- COAGULATION-0.170
- HEDGEHOG_SIGNALING-0.170
- XENOBIOTIC_METABOLISM-0.160
- KRAS_SIGNALING_UP-0.140
- ALLOGRAFT_REJECTION-0.110
- OXIDATIVE_PHOSPHORYLATION-0.110
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
9 twins match this tumor's tissue · 1 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | MNG1196 | — | — | 0.778 |
| 2 | TCGA-E2-A15A-01A-11R-A12D-07 | — | B | 0.729 |
| 3 | b2ea247e-4d51-4d77-a1ef-281bf4dfe249 | — | — | 0.720 |
| 4 | TCGA-AR-A24N-01A-11R-A169-07 | — | B | 0.718 |
| 5 | TCGA-A7-A26J-01A-11R-A169-07 | — | B | 0.717 |
| 6 | TCGA-XF-AAMQ-01A-11R-A42T-07 | — | — | 0.711 |
| 7 | TCGA-E9-A226-01A-21R-A157-07 | — | B | 0.704 |
| 8 | TCGA-A2-A25C-01A-11R-A169-07 | — | B | 0.704 |
| 9 | MNG615 | — | — | 0.694 |
| 10 | MDT-AP-3270 | Med | Medulloblastoma | 0.688 |