BS_FYRDYBMZ
high-grade glioma
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- high-grade glioma
- cancer_type_detailed
- —
- subtype
- —
- cancer_type
- high-grade glioma
- age_years
- 13.529
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- OXIDATIVE_PHOSPHORYLATION+0.526
- HYPOXIA+0.474
- TNFA_SIGNALING_VIA_NFKB+0.474
- INFLAMMATORY_RESPONSE+0.395
- ANGIOGENESIS+0.387
- COAGULATION+0.358
- IL6_JAK_STAT3_SIGNALING+0.340
- REACTIVE_OXYGEN_SPECIES_PATHWAY+0.338
- EPITHELIAL_MESENCHYMAL_TRANSITION+0.329
- MTORC1_SIGNALING+0.327
Top 10 suppressed
- MITOTIC_SPINDLE-0.271
- E2F_TARGETS-0.223
- G2M_CHECKPOINT-0.196
- SPERMATOGENESIS-0.125
- APICAL_SURFACE-0.081
- WNT_BETA_CATENIN_SIGNALING-0.070
- PROTEIN_SECRETION-0.048
- DNA_REPAIR-0.046
- TGF_BETA_SIGNALING-0.010
- UNFOLDED_PROTEIN_RESPONSE+0.015
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
4 twins match this tumor's tissue · 6 come from a different tissue of origin ← cross-tissue dominant
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SRR1347688 | GTEX | — | 0.869 |
| 2 | BS_8RHPJ740 | Ependymoma NOS | — | 0.862 |
| 3 | SRR1071880 | GTEX | — | 0.858 |
| 4 | MNG228 | — | — | 0.852 |
| 5 | SRR1335688 | GTEX | — | 0.851 |
| 6 | AUR-AFEC-TTM4-A-1-1-R-A742-41 | — | C | 0.851 |
| 7 | BS_C51RB0YR | low-grade glioma | — | 0.847 |
| 8 | AUR-AER6-TTM1-A-1-1-R-A742-41 | — | C | 0.845 |
| 9 | MNG919 | — | — | 0.845 |
| 10 | SRR1374414 | GTEX | — | 0.843 |