MNG987
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- E2F_TARGETS+0.523
- MYC_TARGETS_V1+0.458
- G2M_CHECKPOINT+0.448
- INTERFERON_ALPHA_RESPONSE+0.385
- DNA_REPAIR+0.380
- MITOTIC_SPINDLE+0.342
- PROTEIN_SECRETION+0.304
- BILE_ACID_METABOLISM+0.270
- REACTIVE_OXYGEN_SPECIES_PATHWAY+0.236
- OXIDATIVE_PHOSPHORYLATION+0.202
Top 10 suppressed
- PANCREAS_BETA_CELLS-0.504
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.418
- APICAL_SURFACE-0.349
- ANGIOGENESIS-0.339
- HEDGEHOG_SIGNALING-0.338
- COAGULATION-0.336
- TNFA_SIGNALING_VIA_NFKB-0.328
- HYPOXIA-0.290
- TGF_BETA_SIGNALING-0.286
- MYOGENESIS-0.273
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
8 twins match this tumor's tissue · 2 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | BS_EK5PCKY0 | Supratentorial Ependymoma | — | 0.843 |
| 2 | TCGA-58-A46M-01A-11R-A24H-07 | — | cohortSQ2 | 0.828 |
| 3 | MNG274 | — | — | 0.826 |
| 4 | R135 | — | — | 0.819 |
| 5 | TCGA-60-2706-01A-01R-0851-07 | — | cohortA4 | 0.809 |
| 6 | 04e3aeba-c9bd-483d-9484-5ecc0e64a054 | — | — | 0.808 |
| 7 | TCGA-18-3419-01A-01R-0980-07 | — | cohortSQ1 | 0.807 |
| 8 | MNG353 | — | — | 0.806 |
| 9 | SJEPD030854_D1.RNA-Seq | EPN | Posterior Fossa EPN | 0.806 |
| 10 | TCGA-58-A46K-01A-11R-A24H-07 | — | cohortSQ2 | 0.804 |