R181
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- G2M_CHECKPOINT+0.450
- E2F_TARGETS+0.390
- PROTEIN_SECRETION+0.370
- MYC_TARGETS_V1+0.340
- ANDROGEN_RESPONSE+0.320
- UNFOLDED_PROTEIN_RESPONSE+0.260
- MITOTIC_SPINDLE+0.240
- OXIDATIVE_PHOSPHORYLATION+0.190
- MYC_TARGETS_V2+0.170
- PI3K_AKT_MTOR_SIGNALING+0.170
Top 10 suppressed
- ANGIOGENESIS-0.460
- COAGULATION-0.410
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.400
- HEDGEHOG_SIGNALING-0.370
- MYOGENESIS-0.340
- PANCREAS_BETA_CELLS-0.320
- APICAL_JUNCTION-0.290
- KRAS_SIGNALING_DN-0.250
- HYPOXIA-0.240
- ALLOGRAFT_REJECTION-0.230
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
7 twins match this tumor's tissue · 3 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SJEPD030854_D1.RNA-Seq | EPN | Posterior Fossa EPN | 0.905 |
| 2 | TCGA-78-7536-01A-11R-2066-07 | — | cohortA3 | 0.904 |
| 3 | R143 | — | — | 0.889 |
| 4 | MNG1177 | — | — | 0.882 |
| 5 | SRR8526729 | — | cohortSQ1 | 0.876 |
| 6 | R128 | — | — | 0.876 |
| 7 | R361 | — | — | 0.871 |
| 8 | BS_TV5B86ZD | Embryonal tumors | — | 0.868 |
| 9 | BS_QXKRN6CR | EPN | Supratentorial EPN | 0.866 |
| 10 | MNG33 | — | — | 0.861 |