TCGA-LL-A9Q3-01A-11R-A41B-07
— · B
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- B
- subtype
- B
- overall_survival_months
- 18
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- OXIDATIVE_PHOSPHORYLATION+0.440
- MYOGENESIS+0.270
- COAGULATION+0.260
- KRAS_SIGNALING_DN+0.250
- ADIPOGENESIS+0.230
- XENOBIOTIC_METABOLISM+0.220
- UV_RESPONSE_UP+0.210
- GLYCOLYSIS+0.180
- ESTROGEN_RESPONSE_EARLY+0.170
- ESTROGEN_RESPONSE_LATE+0.160
Top 10 suppressed
- E2F_TARGETS-0.510
- G2M_CHECKPOINT-0.510
- TGF_BETA_SIGNALING-0.460
- MITOTIC_SPINDLE-0.450
- UV_RESPONSE_DN-0.430
- ANDROGEN_RESPONSE-0.290
- SPERMATOGENESIS-0.280
- WNT_BETA_CATENIN_SIGNALING-0.240
- HEDGEHOG_SIGNALING-0.180
- MTORC1_SIGNALING-0.160
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
6 twins match this tumor's tissue · 4 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | TCGA-LL-A6FQ-01A-11R-A31O-07 | — | B | 0.842 |
| 2 | TCGA-E2-A572-01A-13R-A31O-07 | — | B | 0.812 |
| 3 | MDT-AP-0720 | Med | Medulloblastoma | 0.799 |
| 4 | ERR2598282 | fetal | fetal | 0.798 |
| 5 | TCGA-LL-A50Y-01A-11R-A266-07 | — | B | 0.791 |
| 6 | DRR168584 | — | — | 0.787 |
| 7 | SJEPD001524_R1.RNA-Seq | EPN | Posterior Fossa EPN | 0.786 |
| 8 | ca188ec2-4185-4871-b71b-d024a37e5654 | — | — | 0.782 |
| 9 | edef6762-dd96-4284-81e6-2e128af287fa | — | — | 0.780 |
| 10 | ERR2598281 | fetal | fetal | 0.777 |