MNG1117
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- MYC_TARGETS_V2+0.554
- OXIDATIVE_PHOSPHORYLATION+0.326
- UNFOLDED_PROTEIN_RESPONSE+0.290
- EPITHELIAL_MESENCHYMAL_TRANSITION+0.274
- GLYCOLYSIS+0.272
- MYC_TARGETS_V1+0.271
- ANGIOGENESIS+0.270
- E2F_TARGETS+0.260
- REACTIVE_OXYGEN_SPECIES_PATHWAY+0.233
- DNA_REPAIR+0.229
Top 10 suppressed
- INTERFERON_ALPHA_RESPONSE-0.553
- INTERFERON_GAMMA_RESPONSE-0.504
- ALLOGRAFT_REJECTION-0.358
- KRAS_SIGNALING_UP-0.297
- UV_RESPONSE_DN-0.295
- TGF_BETA_SIGNALING-0.290
- IL6_JAK_STAT3_SIGNALING-0.285
- ANDROGEN_RESPONSE-0.275
- COMPLEMENT-0.241
- HEME_METABOLISM-0.228
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | MNG1082 | — | — | 0.836 |
| 2 | TCGA-UY-A78M-01A-21R-A352-07 | — | — | 0.825 |
| 3 | TCGA-66-2781-01A-01R-0851-07 | — | cohortSQ2 | 0.809 |
| 4 | MNG715 | — | — | 0.808 |
| 5 | SRR1516100 | — | — | 0.808 |
| 6 | TCGA-UY-A9PD-01A-11R-A38B-07 | — | — | 0.802 |
| 7 | MNG1229 | — | — | 0.800 |
| 8 | MNG581 | — | — | 0.799 |
| 9 | TCGA-E2-A574-01A-11R-A29R-07 | — | E | 0.792 |
| 10 | R97 | — | — | 0.791 |