BS_6N3AFF66
pilocytic astrocytoma
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- pilocytic astrocytoma
- cancer_type_detailed
- —
- subtype
- —
- cancer_type
- pilocytic astrocytoma
- overall_survival_months
- 65.2431011826544
- age_years
- 6.956
- sex
- Male
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- PROTEIN_SECRETION+0.501
- CHOLESTEROL_HOMEOSTASIS+0.471
- ANDROGEN_RESPONSE+0.409
- TGF_BETA_SIGNALING+0.391
- TNFA_SIGNALING_VIA_NFKB+0.386
- BILE_ACID_METABOLISM+0.340
- ADIPOGENESIS+0.327
- INTERFERON_ALPHA_RESPONSE+0.302
- FATTY_ACID_METABOLISM+0.292
- COMPLEMENT+0.289
Top 10 suppressed
- E2F_TARGETS-0.454
- MYC_TARGETS_V2-0.434
- G2M_CHECKPOINT-0.433
- MYC_TARGETS_V1-0.250
- DNA_REPAIR-0.233
- SPERMATOGENESIS-0.181
- PANCREAS_BETA_CELLS-0.169
- MITOTIC_SPINDLE-0.161
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.067
- REACTIVE_OXYGEN_SPECIES_PATHWAY-0.054
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
6 twins match this tumor's tissue · 4 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | BS_SDZY6RZ3 | pilocytic astrocytoma | — | 0.934 |
| 2 | BS_3Q0GTSYH | pilocytic astrocytoma | — | 0.912 |
| 3 | BS_S50KQEXV | low-grade glioma | — | 0.909 |
| 4 | BS_MY9D8XZ1 | pilocytic astrocytoma | — | 0.906 |
| 5 | BS_FJWZ3M7V | low-grade glioma | — | 0.896 |
| 6 | BS_GHNJ4CYC | low-grade glioma | — | 0.895 |
| 7 | BS_7P83Z28P | pilocytic astrocytoma | — | 0.876 |
| 8 | BS_4HQ3T2NC | pilocytic astrocytoma | — | 0.875 |
| 9 | BS_T4JFN54G | low-grade glioma | — | 0.874 |
| 10 | BS_JMHG7GCN | pilocytic astrocytoma | — | 0.873 |