BS_JR5ATB7G
medulloblastoma
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- medulloblastoma
- cancer_type_detailed
- —
- subtype
- —
- cancer_type
- medulloblastoma
- overall_survival_months
- 142.6741130091984
- age_years
- 12.458
- sex
- Male
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- E2F_TARGETS+0.433
- G2M_CHECKPOINT+0.387
- PANCREAS_BETA_CELLS+0.226
- DNA_REPAIR+0.216
- TNFA_SIGNALING_VIA_NFKB+0.211
- SPERMATOGENESIS+0.209
- MYC_TARGETS_V1+0.146
- MYC_TARGETS_V2+0.141
- KRAS_SIGNALING_DN+0.127
- ANGIOGENESIS+0.113
Top 10 suppressed
- INTERFERON_ALPHA_RESPONSE-0.522
- NOTCH_SIGNALING-0.418
- CHOLESTEROL_HOMEOSTASIS-0.413
- PROTEIN_SECRETION-0.401
- MTORC1_SIGNALING-0.384
- INTERFERON_GAMMA_RESPONSE-0.366
- BILE_ACID_METABOLISM-0.321
- UV_RESPONSE_DN-0.302
- ANDROGEN_RESPONSE-0.296
- ADIPOGENESIS-0.293
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
7 twins match this tumor's tissue · 3 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | BS_JT82QGXF | medulloblastoma | — | 0.810 |
| 2 | BS_S1M423AB | Embryonal tumors | — | 0.810 |
| 3 | BS_Z45HD492 | medulloblastoma | — | 0.808 |
| 4 | BS_VVFBW0YH | medulloblastoma | — | 0.803 |
| 5 | TCGA-XF-AAMG-01A-11R-A42T-07 | — | — | 0.799 |
| 6 | BS_TA9WP4TH | medulloblastoma | — | 0.799 |
| 7 | BS_1TWCV047 | Embryonal tumors | — | 0.792 |
| 8 | BS_QT3NZ2YZ | Embryonal tumors | — | 0.792 |
| 9 | BS_HZRM07TW | medulloblastoma | — | 0.790 |
| 10 | SRR934918 | — | — | 0.790 |