TCGA-CV-5432-01A-02R-1686-07
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Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
- sex
- male
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- MYC_TARGETS_V2+0.550
- E2F_TARGETS+0.490
- MYC_TARGETS_V1+0.480
- G2M_CHECKPOINT+0.430
- OXIDATIVE_PHOSPHORYLATION+0.360
- MTORC1_SIGNALING+0.340
- DNA_REPAIR+0.330
- REACTIVE_OXYGEN_SPECIES_PATHWAY+0.270
- CHOLESTEROL_HOMEOSTASIS+0.230
- SPERMATOGENESIS+0.210
Top 10 suppressed
- INTERFERON_ALPHA_RESPONSE-0.610
- INTERFERON_GAMMA_RESPONSE-0.520
- TNFA_SIGNALING_VIA_NFKB-0.450
- INFLAMMATORY_RESPONSE-0.410
- ALLOGRAFT_REJECTION-0.390
- ANGIOGENESIS-0.340
- IL6_JAK_STAT3_SIGNALING-0.330
- TGF_BETA_SIGNALING-0.330
- KRAS_SIGNALING_UP-0.310
- IL2_STAT5_SIGNALING-0.300
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | s0112311 | — | — | 0.912 |
| 2 | TCGA-33-AAS8-01A-11R-A405-07 | — | cohortSQ2 | 0.901 |
| 3 | TCGA-33-4532-01A-01R-1201-07 | — | cohortSQ2 | 0.901 |
| 4 | TCGA-77-6845-01A-11R-1949-07 | — | cohortSQ2 | 0.897 |
| 5 | TCGA-58-A46N-01A-11R-A24H-07 | — | cohortSQ2 | 0.894 |
| 6 | AUR-AFUM-TTM1-A-1-1-R-A743-41 | — | E | 0.892 |
| 7 | b02373ab-6860-4066-aebe-2c8a4cdffeda | — | — | 0.891 |
| 8 | ERR2208894 | — | — | 0.890 |
| 9 | SRR10900551 | — | — | 0.889 |
| 10 | TCGA-85-8354-01A-31R-2326-07 | — | cohortSQ2 | 0.885 |