ULC0428T_S51
— · cohortA1
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- cohortA1
- subtype
- cohortA1
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- INTERFERON_ALPHA_RESPONSE+0.520
- INTERFERON_GAMMA_RESPONSE+0.340
- TGF_BETA_SIGNALING+0.320
- WNT_BETA_CATENIN_SIGNALING+0.320
- MYOGENESIS+0.290
- APICAL_SURFACE+0.270
- COMPLEMENT+0.270
- INFLAMMATORY_RESPONSE+0.270
- UV_RESPONSE_DN+0.250
- HEDGEHOG_SIGNALING+0.230
Top 10 suppressed
- MYC_TARGETS_V2-0.620
- MYC_TARGETS_V1-0.580
- E2F_TARGETS-0.520
- UNFOLDED_PROTEIN_RESPONSE-0.510
- MTORC1_SIGNALING-0.490
- G2M_CHECKPOINT-0.470
- GLYCOLYSIS-0.430
- OXIDATIVE_PHOSPHORYLATION-0.380
- DNA_REPAIR-0.340
- PROTEIN_SECRETION-0.340
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | TCGA-86-A4P8-01A-11R-A24X-07 | — | cohortA1 | 0.922 |
| 2 | TCGA-55-8621-01A-11R-2403-07 | — | cohortA1 | 0.884 |
| 3 | SRR8518288 | — | A | 0.878 |
| 4 | SRR5903557 | — | cohortA1 | 0.877 |
| 5 | SRR6013599 | — | cohortMD2 | 0.877 |
| 6 | TCGA-98-A53C-01A-11R-A262-07 | — | cohortMD2 | 0.869 |
| 7 | TCGA-55-A57B-01A-12R-A39D-07 | — | cohortA1 | 0.868 |
| 8 | TCGA-99-AA5R-01A-11R-A39D-07 | — | cohortA1 | 0.865 |
| 9 | TCGA-55-7574-01A-11R-2039-07 | — | cohortMD2 | 0.861 |
| 10 | 40b98f15-43cb-426b-880c-951a4b28c3e2 | — | — | 0.861 |