MNG213
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- INTERFERON_ALPHA_RESPONSE+0.519
- INTERFERON_GAMMA_RESPONSE+0.467
- EPITHELIAL_MESENCHYMAL_TRANSITION+0.404
- HYPOXIA+0.375
- TNFA_SIGNALING_VIA_NFKB+0.336
- PANCREAS_BETA_CELLS+0.329
- HEDGEHOG_SIGNALING+0.328
- ALLOGRAFT_REJECTION+0.297
- INFLAMMATORY_RESPONSE+0.292
- APOPTOSIS+0.264
Top 10 suppressed
- G2M_CHECKPOINT-0.441
- OXIDATIVE_PHOSPHORYLATION-0.441
- E2F_TARGETS-0.404
- MYC_TARGETS_V2-0.382
- MYC_TARGETS_V1-0.372
- MITOTIC_SPINDLE-0.267
- ADIPOGENESIS-0.219
- FATTY_ACID_METABOLISM-0.192
- ANDROGEN_RESPONSE-0.121
- PI3K_AKT_MTOR_SIGNALING-0.109
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
6 twins match this tumor's tissue · 4 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | BS_699TN5RN | Ganglioglioma | — | 0.852 |
| 2 | MBCProject_3554_T2_RNA | — | A | 0.840 |
| 3 | 20120155.TNBC | — | D | 0.838 |
| 4 | SRR8518199 | — | A | 0.833 |
| 5 | BS_3H71BH6Q | Ganglioglioma | — | 0.831 |
| 6 | R194 | — | — | 0.829 |
| 7 | BS_W97QQYKQ | Ganglioglioma | — | 0.824 |
| 8 | ERR2598314 | fetal | fetal | 0.822 |
| 9 | ULC0467T_S13 | — | cohortSQ1 | 0.817 |
| 10 | ERR2208937 | — | — | 0.817 |
Per-pathway drug coverage
For each elevated pathway in this tumor, the best-reversing drug across the catalog. Uncovered pathways = unmet need at pathway level for this one patient.
0 of 30 elevated pathways have at least one drug that meaningfully reverses them.
| Pathway (elevated) | tumor score | Best drug | reversal magnitude |
|---|---|---|---|
| INTERFERON_ALPHA_RESPONSE | 0.519 | Inavolisib | — uncovered |
| INTERFERON_GAMMA_RESPONSE | 0.467 | Idelalisib | — uncovered |
| EPITHELIAL_MESENCHYMAL_TRANSITION | 0.404 | Inavolisib | — uncovered |
| HYPOXIA | 0.375 | Idelalisib | — uncovered |
| TNFA_SIGNALING_VIA_NFKB | 0.336 | Inavolisib | — uncovered |
| PANCREAS_BETA_CELLS | 0.329 | Cobimetinib | — uncovered |
| HEDGEHOG_SIGNALING | 0.328 | Inavolisib | — uncovered |
| ALLOGRAFT_REJECTION | 0.297 | Idelalisib | — uncovered |
| INFLAMMATORY_RESPONSE | 0.292 | Idelalisib | — uncovered |
| APOPTOSIS | 0.264 | Idelalisib | — uncovered |
| P53_PATHWAY | 0.264 | Idelalisib | — uncovered |
| IL6_JAK_STAT3_SIGNALING | 0.254 | Inavolisib | — uncovered |
| MYOGENESIS | 0.223 | Inavolisib | — uncovered |
| KRAS_SIGNALING_UP | 0.216 | Inavolisib | — uncovered |
| APICAL_JUNCTION | 0.169 | Inavolisib | — uncovered |
| APICAL_SURFACE | 0.152 | Temsirolimus | — uncovered |
| CHOLESTEROL_HOMEOSTASIS | 0.122 | Remibrutinib | — uncovered |
| UV_RESPONSE_DN | 0.120 | Inavolisib | — uncovered |
| GLYCOLYSIS | 0.113 | Inavolisib | — uncovered |
| ESTROGEN_RESPONSE_EARLY | 0.106 | Inavolisib | — uncovered |