SRR23303757
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
- sex
- Male
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- EPITHELIAL_MESENCHYMAL_TRANSITION+0.470
- HYPOXIA+0.420
- TNFA_SIGNALING_VIA_NFKB+0.400
- ANGIOGENESIS+0.370
- HEDGEHOG_SIGNALING+0.340
- MYOGENESIS+0.340
- KRAS_SIGNALING_DN+0.310
- MYC_TARGETS_V2+0.280
- COAGULATION+0.240
- PANCREAS_BETA_CELLS+0.240
Top 10 suppressed
- OXIDATIVE_PHOSPHORYLATION-0.400
- INTERFERON_ALPHA_RESPONSE-0.360
- PROTEIN_SECRETION-0.360
- INTERFERON_GAMMA_RESPONSE-0.330
- FATTY_ACID_METABOLISM-0.310
- PEROXISOME-0.310
- ADIPOGENESIS-0.290
- ANDROGEN_RESPONSE-0.220
- BILE_ACID_METABOLISM-0.170
- MYC_TARGETS_V1-0.170
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | DRR168520 | — | — | 0.838 |
| 2 | SRR8613770 | — | E | 0.814 |
| 3 | R99 | — | — | 0.800 |
| 4 | TCGA-98-A539-01A-31R-A262-07 | — | cohortSQ1 | 0.794 |
| 5 | TCGA-LL-A5YP-01A-21R-A28M-07 | — | E | 0.785 |
| 6 | TCGA-A2-A4RX-01A-11R-A266-07 | — | D | 0.765 |
| 7 | TCGA-90-6837-01A-11R-1949-07 | — | cohortSQ1 | 0.762 |
| 8 | C3N-02289 | — | cohortSQ1 | 0.751 |
| 9 | C3L-02660 | — | cohortSQ1 | 0.749 |
| 10 | 9604472c-4956-4170-8ba7-419f3e8d7418 | — | — | 0.748 |