BS_3G3KWY18
low-grade glioma
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- low-grade glioma
- cancer_type_detailed
- —
- subtype
- —
- cancer_type
- low-grade glioma
- age_years
- 12.153
- sex
- Female
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- NOTCH_SIGNALING+0.503
- INTERFERON_ALPHA_RESPONSE+0.485
- INTERFERON_GAMMA_RESPONSE+0.478
- IL6_JAK_STAT3_SIGNALING+0.474
- HEDGEHOG_SIGNALING+0.458
- INFLAMMATORY_RESPONSE+0.456
- TNFA_SIGNALING_VIA_NFKB+0.418
- ALLOGRAFT_REJECTION+0.410
- ADIPOGENESIS+0.384
- TGF_BETA_SIGNALING+0.378
Top 10 suppressed
- E2F_TARGETS-0.557
- G2M_CHECKPOINT-0.556
- MYC_TARGETS_V1-0.404
- MYC_TARGETS_V2-0.402
- MITOTIC_SPINDLE-0.350
- UNFOLDED_PROTEIN_RESPONSE-0.297
- SPERMATOGENESIS-0.242
- DNA_REPAIR-0.090
- MTORC1_SIGNALING-0.087
- GLYCOLYSIS+0.056
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
5 twins match this tumor's tissue · 5 come from a different tissue of origin ← cross-tissue dominant
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | BS_EFEZB0ZH | low-grade glioma | — | 0.928 |
| 2 | TCGA-05-4403-01A-01R-1206-07 | — | cohortA1 | 0.924 |
| 3 | BS_WG203ECV | pilocytic astrocytoma | — | 0.921 |
| 4 | BS_V3REENH9 | pilocytic astrocytoma | — | 0.921 |
| 5 | BS_3W07B2TG | subependymal giant cell astrocytoma(SEGA) | — | 0.919 |
| 6 | BS_HC5M8JTC | low-grade glioma | — | 0.917 |
| 7 | BS_FJZPQZ2C | pleomorphic xanthoastrocytoma(PXA) | — | 0.917 |
| 8 | BS_MY9D8XZ1 | pilocytic astrocytoma | — | 0.915 |
| 9 | BS_24AHZ9ZW | low-grade glioma | — | 0.911 |
| 10 | BS_NB5XWMJT | low-grade glioma | — | 0.909 |