SRR1319539
GTEX
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- GTEX
- cancer_type_detailed
- —
- subtype
- —
- cancer_type
- GTEX
- sex
- Female
GSVA pathway preview (0 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
7 twins match this tumor's tissue · 3 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | MDT-AP-2892 | Med | Medulloblastoma | 0.957 |
| 2 | MDT-AP-1215 | Med | Medulloblastoma | 0.954 |
| 3 | SRR1397906 | GTEX | — | 0.952 |
| 4 | SRR820379 | GTEX | — | 0.950 |
| 5 | SRR1415832 | GTEX | — | 0.948 |
| 6 | SRR1389059 | GTEX | — | 0.940 |
| 7 | SRR8392886 | — | cohortA1 | 0.936 |
| 8 | sclc55A_S50.txt | — | cohortMD2 | 0.936 |
| 9 | BS_HHPA8NJ2 | Med | Medulloblastoma | 0.935 |
| 10 | SRR1388168 | GTEX | — | 0.934 |
Per-pathway drug coverage
For each elevated pathway in this tumor, the best-reversing drug across the catalog. Uncovered pathways = unmet need at pathway level for this one patient.
0 of 24 elevated pathways have at least one drug that meaningfully reverses them.
| Pathway (elevated) | tumor score | Best drug | reversal magnitude |
|---|---|---|---|
| INFLAMMATORY_RESPONSE | 0.508 | Idelalisib | — uncovered |
| IL6_JAK_STAT3_SIGNALING | 0.503 | Inavolisib | — uncovered |
| ALLOGRAFT_REJECTION | 0.498 | Idelalisib | — uncovered |
| INTERFERON_GAMMA_RESPONSE | 0.459 | Idelalisib | — uncovered |
| EPITHELIAL_MESENCHYMAL_TRANSITION | 0.444 | Inavolisib | — uncovered |
| PANCREAS_BETA_CELLS | 0.427 | Cobimetinib | — uncovered |
| INTERFERON_ALPHA_RESPONSE | 0.425 | Inavolisib | — uncovered |
| ANGIOGENESIS | 0.411 | Remibrutinib | — uncovered |
| KRAS_SIGNALING_DN | 0.381 | Remibrutinib | — uncovered |
| KRAS_SIGNALING_UP | 0.335 | Inavolisib | — uncovered |
| TNFA_SIGNALING_VIA_NFKB | 0.326 | Inavolisib | — uncovered |
| COAGULATION | 0.312 | Binimetinib | — uncovered |
| MYOGENESIS | 0.312 | Inavolisib | — uncovered |
| ESTROGEN_RESPONSE_LATE | 0.302 | Idelalisib | — uncovered |
| APICAL_SURFACE | 0.259 | Temsirolimus | — uncovered |
| COMPLEMENT | 0.259 | Inavolisib | — uncovered |
| IL2_STAT5_SIGNALING | 0.250 | Idelalisib | — uncovered |
| APOPTOSIS | 0.238 | Idelalisib | — uncovered |
| ESTROGEN_RESPONSE_EARLY | 0.193 | Inavolisib | — uncovered |
| APICAL_JUNCTION | 0.165 | Inavolisib | — uncovered |