SRR1797234

— · cohortMD2

92883405-15bf-546c-ab8f-e23a8bef1aea

Score in workbench →

Clinical attributes

From the source cohort, normalized into canonical keys plus the project's native columns.

cancer_type: —
cancer_type_detailed: —
subtype: cohortMD2
subtype: cohortMD2
age_years: 57

GSVA pathway preview (0 Hallmark scores)

MeasuredDerivedReference

Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.

HTTPException: HTTP Error: Request returned HTTP 429 for HTTP HEAD to 'https://pub-e056b053afc04eec88337b62541f3025.r2.dev/oncoscape/lung-landscapes/6/gsva.parquet' LINE 1: SELECT pathway_library_id, pathway_name, gsva_score FROM read_parquet('https://pub-e056b053afc04eec88337b62541f3025... ^

Patient twins — nearest pathway neighbors

MeasuredDerived

10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.

10 twins match this tumor's tissue · 0 come from a different tissue of origin

#	Sample	Cancer type	Subtype	cos similarity
1	TCGA-S2-AA1A-01A-12R-A39D-07 lung-landscapes@6	—	cohortA1	0.927
2	TCGA-38-A44F-01A-11R-A24H-07 lung-landscapes@6	—	cohortA1	0.924
3	TCGA-99-AA5R-01A-11R-A39D-07 lung-landscapes@6	—	cohortA1	0.918
4	TCGA-86-8671-01A-11R-2403-07 lung-landscapes@6	—	cohortMD2	0.916
5	TCGA-55-8621-01A-11R-2403-07 lung-landscapes@6	—	cohortA1	0.914
6	TCGA-98-A53H-01A-12R-A262-07 lung-landscapes@6	—	cohortA1	0.908
7	SRR12202445 bladder-landscape@3	—	—	0.906
8	TCGA-49-AARO-01A-12R-A41B-07 lung-landscapes@6	—	cohortA1	0.901
9	SRR2774280 melanoma-umap@29	—	—	0.901
10	TCGA-55-8619-01A-11R-2403-07 lung-landscapes@6	—	cohortA1	0.901