TCGA-Z7-A8R6-01A-11R-A41B-07
— · B
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- B
- subtype
- B
- overall_survival_months
- 109
- os_event
- false
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- E2F_TARGETS+0.580
- G2M_CHECKPOINT+0.480
- MYC_TARGETS_V1+0.440
- DNA_REPAIR+0.410
- MYC_TARGETS_V2+0.370
- ESTROGEN_RESPONSE_LATE+0.340
- PANCREAS_BETA_CELLS+0.340
- OXIDATIVE_PHOSPHORYLATION+0.260
- ESTROGEN_RESPONSE_EARLY+0.220
- SPERMATOGENESIS+0.180
Top 10 suppressed
- ALLOGRAFT_REJECTION-0.350
- PROTEIN_SECRETION-0.350
- ANGIOGENESIS-0.340
- KRAS_SIGNALING_UP-0.340
- INFLAMMATORY_RESPONSE-0.320
- HEDGEHOG_SIGNALING-0.300
- UV_RESPONSE_DN-0.300
- ANDROGEN_RESPONSE-0.290
- INTERFERON_GAMMA_RESPONSE-0.270
- IL6_JAK_STAT3_SIGNALING-0.220
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
8 twins match this tumor's tissue · 2 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | AUR-AFUM-TTM1-A-1-1-R-A743-41 | — | E | 0.855 |
| 2 | BS_74FS6GMW | ATRT | — | 0.820 |
| 3 | TCGA-A8-A079-01A-21R-A00Z-07 | — | B | 0.818 |
| 4 | TCGA-XF-A8HB-01A-11R-A36F-07 | — | — | 0.815 |
| 5 | 6bc5d616-670c-4778-a769-d5b64fc51d8e | — | — | 0.814 |
| 6 | SRR6013552 | — | cohortSQ2 | 0.813 |
| 7 | TCGA-85-8354-01A-31R-2326-07 | — | cohortSQ2 | 0.813 |
| 8 | TCGA-39-5037-01A-01R-1443-07 | — | cohortSQ2 | 0.810 |
| 9 | MDT-AP-0843 | Med | Medulloblastoma | 0.808 |
| 10 | TCGA-56-8304-01A-11R-2326-07 | — | cohortSQ1 | 0.807 |