SRR25617843
— · B
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- B
- subtype
- B
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- PANCREAS_BETA_CELLS+0.450
- HEDGEHOG_SIGNALING+0.320
- MYOGENESIS+0.300
- ANGIOGENESIS+0.280
- COAGULATION+0.270
- KRAS_SIGNALING_DN+0.270
- BILE_ACID_METABOLISM+0.230
- XENOBIOTIC_METABOLISM+0.190
- ESTROGEN_RESPONSE_EARLY+0.160
- ESTROGEN_RESPONSE_LATE+0.150
Top 10 suppressed
- INTERFERON_ALPHA_RESPONSE-0.580
- E2F_TARGETS-0.560
- G2M_CHECKPOINT-0.560
- INTERFERON_GAMMA_RESPONSE-0.520
- MYC_TARGETS_V1-0.450
- IL6_JAK_STAT3_SIGNALING-0.440
- ALLOGRAFT_REJECTION-0.400
- TNFA_SIGNALING_VIA_NFKB-0.380
- INFLAMMATORY_RESPONSE-0.370
- MITOTIC_SPINDLE-0.360
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
3 twins match this tumor's tissue · 7 come from a different tissue of origin ← cross-tissue dominant
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SRR25617874 | — | B | 0.916 |
| 2 | SRR1336158 | GTEX | — | 0.888 |
| 3 | TCGA-NJ-A55R-01A-11R-A262-07 | — | cohortA3 | 0.886 |
| 4 | SRR1316297 | GTEX | — | 0.883 |
| 5 | SRR1331335 | GTEX | — | 0.878 |
| 6 | SRR1323043 | GTEX | — | 0.876 |
| 7 | aMVAC.P_003_TURBT_S220 | — | — | 0.874 |
| 8 | SRR1332796 | GTEX | — | 0.869 |
| 9 | SRR1354734 | GTEX | — | 0.868 |
| 10 | SRR1441546 | GTEX | — | 0.867 |