AUR-AFR3-TTP1-A-2-1-R-A743-41
— · C
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- C
- subtype
- C
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- MYC_TARGETS_V1+0.610
- MYC_TARGETS_V2+0.600
- E2F_TARGETS+0.580
- EPITHELIAL_MESENCHYMAL_TRANSITION+0.520
- MTORC1_SIGNALING+0.500
- G2M_CHECKPOINT+0.480
- ANGIOGENESIS+0.430
- UNFOLDED_PROTEIN_RESPONSE+0.410
- OXIDATIVE_PHOSPHORYLATION+0.400
- PROTEIN_SECRETION+0.310
Top 10 suppressed
- INTERFERON_ALPHA_RESPONSE-0.330
- INTERFERON_GAMMA_RESPONSE-0.220
- KRAS_SIGNALING_DN-0.140
- IL6_JAK_STAT3_SIGNALING-0.110
- HEME_METABOLISM-0.100
- HEDGEHOG_SIGNALING-0.070
- XENOBIOTIC_METABOLISM-0.050
- BILE_ACID_METABOLISM-0.030
- MYOGENESIS+0.000
- P53_PATHWAY+0.000
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
9 twins match this tumor's tissue · 1 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SRR10900569 | — | — | 0.880 |
| 2 | 6a8cad2e-350a-4c0b-9680-41d83ef1eb5d | — | — | 0.855 |
| 3 | SRR15030865 | — | — | 0.855 |
| 4 | 113340B4-B092-4B8C-8A13-5932525B0C33 | — | — | 0.853 |
| 5 | MNG402 | — | — | 0.851 |
| 6 | BS_81SP2HX4 | Med | Medulloblastoma | 0.848 |
| 7 | TCGA-77-7337-01A-21R-2045-07 | — | cohortSQ1 | 0.843 |
| 8 | SRR8943009 | — | — | 0.831 |
| 9 | FB7673F7-FF7F-4C3C-A8C6-9C11C6BB71D5 | — | — | 0.829 |
| 10 | TCGA-UY-A78L-01A-12R-A33J-07 | — | — | 0.826 |