ea89121f-2c74-433d-8047-898dc963bf35
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Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
- age_years
- 71.5318275154004
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- MYOGENESIS+0.410
- PANCREAS_BETA_CELLS+0.260
- WNT_BETA_CATENIN_SIGNALING+0.240
- KRAS_SIGNALING_DN+0.170
- UV_RESPONSE_DN+0.170
- TGF_BETA_SIGNALING+0.120
- HEDGEHOG_SIGNALING+0.110
- SPERMATOGENESIS+0.110
- APICAL_JUNCTION+0.100
- UV_RESPONSE_UP+0.020
Top 10 suppressed
- ALLOGRAFT_REJECTION-0.550
- IL6_JAK_STAT3_SIGNALING-0.540
- INFLAMMATORY_RESPONSE-0.520
- INTERFERON_GAMMA_RESPONSE-0.500
- TNFA_SIGNALING_VIA_NFKB-0.480
- INTERFERON_ALPHA_RESPONSE-0.420
- COMPLEMENT-0.390
- CHOLESTEROL_HOMEOSTASIS-0.360
- MTORC1_SIGNALING-0.360
- FATTY_ACID_METABOLISM-0.350
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
9 twins match this tumor's tissue · 1 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | ca7ac1e1-4c44-40a5-8094-eeebc0c2c5a2 | — | — | 0.876 |
| 2 | TCGA-CN-A49A-01A-11R-A24H-07 | — | — | 0.874 |
| 3 | ERR2598227 | fetal | fetal | 0.845 |
| 4 | TCGA-90-A4ED-01A-31R-A24Z-07 | — | cohortMD1 | 0.843 |
| 5 | e3d71c3f-4e56-45fa-be88-2cf444b70a5c | — | — | 0.839 |
| 6 | SRR8392885 | — | cohortA3 | 0.838 |
| 7 | SRR4195662 | — | — | 0.838 |
| 8 | ca7940e6-af7e-44fd-a6fc-5d86dc1d86c4 | — | — | 0.837 |
| 9 | AUR-AD9E-TTM2-A-1-1-R-A542-39 | — | B | 0.837 |
| 10 | MBCProject_0589_T1_RNA | — | A | 0.834 |