AUR-AFE9-TTP1-A-1-0-R-A741-41
— · D
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- D
- subtype
- D
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- TNFA_SIGNALING_VIA_NFKB+0.440
- UV_RESPONSE_DN+0.370
- ANDROGEN_RESPONSE+0.320
- PROTEIN_SECRETION+0.300
- INFLAMMATORY_RESPONSE+0.250
- TGF_BETA_SIGNALING+0.240
- IL6_JAK_STAT3_SIGNALING+0.230
- MITOTIC_SPINDLE+0.180
- KRAS_SIGNALING_UP+0.150
- EPITHELIAL_MESENCHYMAL_TRANSITION+0.140
Top 10 suppressed
- MYC_TARGETS_V2-0.470
- REACTIVE_OXYGEN_SPECIES_PATHWAY-0.440
- OXIDATIVE_PHOSPHORYLATION-0.410
- MYOGENESIS-0.350
- GLYCOLYSIS-0.330
- WNT_BETA_CATENIN_SIGNALING-0.320
- INTERFERON_ALPHA_RESPONSE-0.310
- COAGULATION-0.280
- DNA_REPAIR-0.260
- CHOLESTEROL_HOMEOSTASIS-0.250
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | c22c07cb-8215-47e8-9525-074fda8d7d59 | — | — | 0.815 |
| 2 | AUR-AFE4-TTP1-A-1-0-R-A741-41 | — | D | 0.790 |
| 3 | 023160e4-1d9a-499c-9bfa-1b3aacf284f2 | — | — | 0.743 |
| 4 | TCGA-A7-A13E-01B-06R-A277-07 | — | D | 0.742 |
| 5 | cd10f4f7-d92b-4152-8595-332686e4605a | — | — | 0.739 |
| 6 | MNG609 | — | — | 0.730 |
| 7 | b9389390-aa03-406c-957e-2bc264f9468e | — | — | 0.723 |
| 8 | TCGA-44-2665-01B-06R-A277-07 | — | cohortMD2 | 0.713 |
| 9 | SRR934834 | — | — | 0.712 |
| 10 | 5abd486a-6aed-4dcf-a2a2-2537af6cdd9c | — | — | 0.707 |