289b3dee-bd46-4286-8e7b-86ffb573d37e
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- ALLOGRAFT_REJECTION+0.400
- IL6_JAK_STAT3_SIGNALING+0.300
- INTERFERON_ALPHA_RESPONSE+0.300
- INTERFERON_GAMMA_RESPONSE+0.300
- KRAS_SIGNALING_DN+0.200
- CHOLESTEROL_HOMEOSTASIS+0.100
- COMPLEMENT+0.100
- HYPOXIA+0.100
- IL2_STAT5_SIGNALING+0.100
- INFLAMMATORY_RESPONSE+0.100
Top 10 suppressed
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.500
- ANGIOGENESIS-0.400
- HEDGEHOG_SIGNALING-0.400
- MITOTIC_SPINDLE-0.400
- MYC_TARGETS_V2-0.400
- PROTEIN_SECRETION-0.400
- TGF_BETA_SIGNALING-0.400
- UV_RESPONSE_DN-0.400
- APICAL_JUNCTION-0.300
- COAGULATION-0.300
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
9 twins match this tumor's tissue · 1 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | TCGA-ZF-A9R7-01A-11R-A38B-07 | — | — | 0.796 |
| 2 | TCGA-GM-A2DO-01A-11R-A18M-07 | — | D | 0.782 |
| 3 | aeac6db7-09bd-45f9-a5fd-c8358f86bff8 | — | — | 0.769 |
| 4 | TCGA-B6-A408-01A-12R-A24H-07 | — | A | 0.766 |
| 5 | 362a2015-1791-4934-be81-df39540b38ff | — | — | 0.764 |
| 6 | TCGA-CV-A461-01A-41R-A266-07 | — | — | 0.762 |
| 7 | s0122145 | — | — | 0.761 |
| 8 | OCIAML3_HAEMATOPOIETIC_AND_LYMPHOID_TISSUE | AML | — | 0.754 |
| 9 | TCGA-LL-A5YN-01A-11R-A28M-07 | — | B | 0.746 |
| 10 | b03d2223-38c1-4bb3-be8b-27db05f87b66 | — | — | 0.745 |