311f1988-e21e-4130-b944-2a34d7d46d28
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Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
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- cancer_type_detailed
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- subtype
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GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- ALLOGRAFT_REJECTION+0.600
- IL6_JAK_STAT3_SIGNALING+0.600
- INTERFERON_ALPHA_RESPONSE+0.600
- INTERFERON_GAMMA_RESPONSE+0.600
- INFLAMMATORY_RESPONSE+0.500
- COMPLEMENT+0.400
- IL2_STAT5_SIGNALING+0.400
- PANCREAS_BETA_CELLS+0.400
- APOPTOSIS+0.300
- COAGULATION+0.300
Top 10 suppressed
- MYC_TARGETS_V2-0.600
- DNA_REPAIR-0.400
- E2F_TARGETS-0.400
- G2M_CHECKPOINT-0.300
- MYC_TARGETS_V1-0.300
- OXIDATIVE_PHOSPHORYLATION-0.300
- UNFOLDED_PROTEIN_RESPONSE-0.200
- WNT_BETA_CATENIN_SIGNALING-0.200
- MYOGENESIS-0.100
- P53_PATHWAY-0.100
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
7 twins match this tumor's tissue · 3 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | bd09bf00-3fb3-41fc-ae4d-4ac68a925a6b | — | — | 0.898 |
| 2 | 2833b2f4-e943-4570-96c2-a42c127cd1fa | — | — | 0.889 |
| 3 | TCGA-CN-5369-01A-01R-1436-07 | — | — | 0.886 |
| 4 | BS_02NZT8CE | low-grade glioma | — | 0.886 |
| 5 | BS_699TN5RN | Ganglioglioma | — | 0.875 |
| 6 | 74cffe84-dca8-4673-925a-9e0d6344832a | — | — | 0.874 |
| 7 | ERR2208891 | — | — | 0.873 |
| 8 | BS_C6SKJG3N | pilocytic astrocytoma | — | 0.872 |
| 9 | TCGA-AC-A2FB-01A-11R-A17B-07 | — | A | 0.862 |
| 10 | R323 | — | — | 0.861 |