GSM6454747
— · F
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- F
- subtype
- F
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- ANDROGEN_RESPONSE+0.470
- PROTEIN_SECRETION+0.440
- UV_RESPONSE_DN+0.410
- XENOBIOTIC_METABOLISM+0.370
- ADIPOGENESIS+0.350
- BILE_ACID_METABOLISM+0.340
- FATTY_ACID_METABOLISM+0.330
- KRAS_SIGNALING_UP+0.330
- PEROXISOME+0.310
- REACTIVE_OXYGEN_SPECIES_PATHWAY+0.260
Top 10 suppressed
- MYC_TARGETS_V2-0.580
- E2F_TARGETS-0.520
- INTERFERON_ALPHA_RESPONSE-0.480
- WNT_BETA_CATENIN_SIGNALING-0.470
- G2M_CHECKPOINT-0.450
- MYC_TARGETS_V1-0.380
- INTERFERON_GAMMA_RESPONSE-0.280
- KRAS_SIGNALING_DN-0.250
- UV_RESPONSE_UP-0.250
- HEDGEHOG_SIGNALING-0.240
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SRR8518149 | — | F | 0.844 |
| 2 | SRR8518177 | — | F | 0.830 |
| 3 | SRR8518325 | — | F | 0.814 |
| 4 | SRR8613737 | — | F | 0.806 |
| 5 | SRR8613755 | — | F | 0.796 |
| 6 | SRR4195645 | — | — | 0.779 |
| 7 | SRR8518315 | — | F | 0.771 |
| 8 | SRR8518401 | — | F | 0.767 |
| 9 | SRR35579842 | — | A | 0.762 |
| 10 | 5c3c4b79-0682-4f19-96aa-071316a354d4 | — | — | 0.760 |