TCGA-2F-A9KP-01A-11R-A38B-07
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
- overall_survival_months
- 11.95795007
- os_event
- true
- sex
- Male
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- MYC_TARGETS_V2+0.590
- MYC_TARGETS_V1+0.490
- G2M_CHECKPOINT+0.420
- E2F_TARGETS+0.390
- UNFOLDED_PROTEIN_RESPONSE+0.290
- MITOTIC_SPINDLE+0.270
- PEROXISOME+0.230
- MTORC1_SIGNALING+0.170
- OXIDATIVE_PHOSPHORYLATION+0.170
- PROTEIN_SECRETION+0.170
Top 10 suppressed
- INTERFERON_ALPHA_RESPONSE-0.640
- INTERFERON_GAMMA_RESPONSE-0.570
- ALLOGRAFT_REJECTION-0.550
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.510
- IL6_JAK_STAT3_SIGNALING-0.490
- INFLAMMATORY_RESPONSE-0.430
- COMPLEMENT-0.420
- KRAS_SIGNALING_UP-0.370
- COAGULATION-0.350
- APICAL_JUNCTION-0.320
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SRR8518295 | — | E | 0.931 |
| 2 | TCGA-77-8154-01A-11R-2247-07 | — | cohortSQ1 | 0.915 |
| 3 | TCGA-HQ-A2OE-01A-11R-A206-07 | — | — | 0.912 |
| 4 | fea46737-a2b3-49d4-8358-d0737546b6da | — | — | 0.911 |
| 5 | TCGA-85-8070-01A-11R-2247-07 | — | cohortSQ2 | 0.911 |
| 6 | a8ce7460-8ccd-4638-a854-55c4068af6ec | — | — | 0.909 |
| 7 | SRR8943005 | — | — | 0.909 |
| 8 | 236350e9-8964-42ae-8880-d2f2281ff993 | — | — | 0.906 |
| 9 | TCGA-A8-A09C-01A-11R-A00Z-07 | — | B | 0.900 |
| 10 | SAMN03290927 | — | — | 0.900 |