TCGA-C8-A12V-01A-11R-A115-07
— · D
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- D
- subtype
- D
- overall_survival_months
- 13
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- INTERFERON_ALPHA_RESPONSE+0.730
- INTERFERON_GAMMA_RESPONSE+0.680
- ALLOGRAFT_REJECTION+0.650
- IL6_JAK_STAT3_SIGNALING+0.500
- INFLAMMATORY_RESPONSE+0.500
- COMPLEMENT+0.420
- TNFA_SIGNALING_VIA_NFKB+0.390
- IL2_STAT5_SIGNALING+0.320
- WNT_BETA_CATENIN_SIGNALING+0.310
- KRAS_SIGNALING_UP+0.290
Top 10 suppressed
- ESTROGEN_RESPONSE_EARLY-0.500
- ESTROGEN_RESPONSE_LATE-0.450
- OXIDATIVE_PHOSPHORYLATION-0.370
- PROTEIN_SECRETION-0.370
- ANDROGEN_RESPONSE-0.330
- FATTY_ACID_METABOLISM-0.280
- ADIPOGENESIS-0.270
- CHOLESTEROL_HOMEOSTASIS-0.240
- UV_RESPONSE_DN-0.230
- TGF_BETA_SIGNALING-0.220
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | TCGA-BH-A18V-06A-11R-A213-07 | — | D | 0.911 |
| 2 | TCGA-A2-A0ST-01A-12R-A084-07 | — | D | 0.905 |
| 3 | TCGA-PL-A8LZ-01A-31R-A36F-07 | — | D | 0.882 |
| 4 | TCGA-B6-A0RT-01A-21R-A084-07 | — | D | 0.878 |
| 5 | TCGA-AR-A1AJ-01A-21R-A12P-07 | — | D | 0.869 |
| 6 | SRR29022833 | — | D | 0.863 |
| 7 | SRR8613787 | — | D | 0.857 |
| 8 | TCGA-EW-A1OV-01A-11R-A144-07 | — | D | 0.855 |
| 9 | TCGA-E9-A3QA-01A-61R-A22K-07 | — | D | 0.855 |
| 10 | TCGA-E2-A573-01A-11R-A29R-07 | — | E | 0.853 |