TCGA-BH-A8G0-01A-11R-A352-07
— · A
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- A
- subtype
- A
- overall_survival_months
- 22
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- EPITHELIAL_MESENCHYMAL_TRANSITION+0.430
- COAGULATION+0.390
- KRAS_SIGNALING_UP+0.390
- MYOGENESIS+0.370
- WNT_BETA_CATENIN_SIGNALING+0.320
- ALLOGRAFT_REJECTION+0.310
- ANGIOGENESIS+0.300
- IL6_JAK_STAT3_SIGNALING+0.300
- HEDGEHOG_SIGNALING+0.290
- APICAL_JUNCTION+0.270
Top 10 suppressed
- E2F_TARGETS-0.740
- MYC_TARGETS_V1-0.700
- G2M_CHECKPOINT-0.670
- MYC_TARGETS_V2-0.670
- MTORC1_SIGNALING-0.550
- OXIDATIVE_PHOSPHORYLATION-0.530
- PROTEIN_SECRETION-0.510
- UNFOLDED_PROTEIN_RESPONSE-0.460
- DNA_REPAIR-0.420
- INTERFERON_ALPHA_RESPONSE-0.390
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | TCGA-LL-A440-01A-11R-A24H-07 | — | A | 0.962 |
| 2 | TCGA-AR-A2LN-01A-21R-A18M-07 | — | A | 0.928 |
| 3 | 89fa1644-e0e3-4d75-9250-b5eb4fb67593 | — | — | 0.922 |
| 4 | TCGA-FD-A5BR-01A-11R-A26T-07 | — | — | 0.918 |
| 5 | aMVAC.P_004_TURBT_S222 | — | — | 0.916 |
| 6 | TCGA-50-8459-01A-11R-2326-07 | — | cohortMD2 | 0.913 |
| 7 | SRR8518299 | — | A | 0.912 |
| 8 | TCGA-99-AA5R-01A-11R-A39D-07 | — | cohortA1 | 0.911 |
| 9 | TCGA-GM-A3XN-01A-12R-A22U-07 | — | A | 0.911 |
| 10 | TCGA-93-7348-01A-21R-2039-07 | — | cohortA1 | 0.910 |