TCGA-CR-6467-01A-11R-1873-07
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
- sex
- male
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- E2F_TARGETS+0.530
- G2M_CHECKPOINT+0.380
- OXIDATIVE_PHOSPHORYLATION+0.360
- MITOTIC_SPINDLE+0.210
- ALLOGRAFT_REJECTION+0.200
- SPERMATOGENESIS+0.130
- APICAL_SURFACE+0.080
- DNA_REPAIR+0.080
- WNT_BETA_CATENIN_SIGNALING+0.020
- ADIPOGENESIS+0.010
Top 10 suppressed
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.530
- INTERFERON_ALPHA_RESPONSE-0.440
- MYOGENESIS-0.430
- CHOLESTEROL_HOMEOSTASIS-0.380
- COAGULATION-0.360
- UNFOLDED_PROTEIN_RESPONSE-0.360
- PANCREAS_BETA_CELLS-0.350
- PROTEIN_SECRETION-0.350
- APICAL_JUNCTION-0.330
- HEDGEHOG_SIGNALING-0.330
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | TCGA-CR-5248-01A-01R-2016-07 | — | — | 0.881 |
| 2 | TCGA-QK-A6V9-01A-11R-A34R-07 | — | — | 0.861 |
| 3 | TCGA-BB-4223-01A-01R-1436-07 | — | — | 0.830 |
| 4 | TCGA-CV-5443-01A-01R-1514-07 | — | — | 0.828 |
| 5 | TCGA-DQ-7591-01A-11R-2081-07 | — | — | 0.822 |
| 6 | SRR2932832 | — | — | 0.813 |
| 7 | TCGA-BB-4228-01A-01R-1436-07 | — | — | 0.806 |
| 8 | TCGA-CN-5374-01A-01R-1436-07 | — | — | 0.806 |
| 9 | 5ea84fac-788c-458f-b820-b80224a4dbc2 | — | — | 0.800 |
| 10 | TCGA-43-7658-01A-11R-2125-07 | — | cohortMD1 | 0.800 |