563e85fb-9532-4d69-a1b5-2bc77f237b77
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Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
- age_years
- 70.2505133470226
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- MYOGENESIS+0.440
- BILE_ACID_METABOLISM+0.380
- UV_RESPONSE_DN+0.380
- EPITHELIAL_MESENCHYMAL_TRANSITION+0.370
- APICAL_JUNCTION+0.310
- HEDGEHOG_SIGNALING+0.280
- ESTROGEN_RESPONSE_EARLY+0.250
- ANDROGEN_RESPONSE+0.220
- KRAS_SIGNALING_UP+0.220
- ADIPOGENESIS+0.190
Top 10 suppressed
- INTERFERON_ALPHA_RESPONSE-0.520
- INTERFERON_GAMMA_RESPONSE-0.480
- E2F_TARGETS-0.430
- G2M_CHECKPOINT-0.380
- DNA_REPAIR-0.330
- MYC_TARGETS_V1-0.290
- ALLOGRAFT_REJECTION-0.270
- IL6_JAK_STAT3_SIGNALING-0.270
- OXIDATIVE_PHOSPHORYLATION-0.250
- REACTIVE_OXYGEN_SPECIES_PATHWAY-0.230
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SRR35579814 | — | A | 0.822 |
| 2 | 20040084.LumA | — | A | 0.818 |
| 3 | TCGA-HN-A2OB-01A-21R-A27Q-07 | — | A | 0.811 |
| 4 | ERR2208930 | — | — | 0.806 |
| 5 | SRR8613781 | — | A | 0.803 |
| 6 | TCGA-K4-AAQO-01A-11R-A38B-07 | — | — | 0.800 |
| 7 | ULC0515T_S15 | — | cohortA1 | 0.796 |
| 8 | 20060260.Her2HRpos | — | A | 0.796 |
| 9 | s0095156 | — | — | 0.794 |
| 10 | BSR_18_0092_S48 | — | A | 0.792 |