TCGA-E9-A1RD-01A-11R-A157-07
— · B
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- B
- subtype
- B
- overall_survival_months
- 1
- os_event
- false
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- INTERFERON_ALPHA_RESPONSE+0.500
- PROTEIN_SECRETION+0.430
- OXIDATIVE_PHOSPHORYLATION+0.240
- HEME_METABOLISM+0.210
- PEROXISOME+0.200
- UV_RESPONSE_DN+0.200
- ESTROGEN_RESPONSE_EARLY+0.180
- FATTY_ACID_METABOLISM+0.160
- INTERFERON_GAMMA_RESPONSE+0.120
- TGF_BETA_SIGNALING+0.090
Top 10 suppressed
- MYC_TARGETS_V2-0.530
- ALLOGRAFT_REJECTION-0.440
- TNFA_SIGNALING_VIA_NFKB-0.400
- INFLAMMATORY_RESPONSE-0.350
- APICAL_JUNCTION-0.330
- E2F_TARGETS-0.300
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.290
- IL6_JAK_STAT3_SIGNALING-0.290
- IL2_STAT5_SIGNALING-0.280
- G2M_CHECKPOINT-0.270
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
9 twins match this tumor's tissue · 1 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SRR1313122 | — | B | 0.845 |
| 2 | TCGA-A8-A083-01A-21R-A00Z-07 | — | B | 0.833 |
| 3 | TCGA-C8-A1HE-01A-11R-A13Q-07 | — | B | 0.810 |
| 4 | TCGA-E2-A15P-01A-11R-A115-07 | — | B | 0.805 |
| 5 | TCGA-A8-A099-01A-11R-A00Z-07 | — | B | 0.800 |
| 6 | C3N-03073 | — | cohortA1 | 0.797 |
| 7 | EPT0519 | EPN | Posterior Fossa EPN | 0.783 |
| 8 | DRR168512 | — | — | 0.769 |
| 9 | SRR12202456 | — | — | 0.769 |
| 10 | TCGA-44-2666-01A-01R-A278-07 | — | cohortMD2 | 0.766 |