BS_WYERXS4G
EPN · Supratentorial EPN
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- EPN
- cancer_type_detailed
- —
- subtype
- Supratentorial EPN
- cancer_type
- EPN
- subtype
- Supratentorial EPN
- overall_survival_months
- 54.12
- os_event
- false
- age_years
- 16.688
- sex
- F
- race
- White
- fusion
- other YAP1
- e1_e2
- E2
- umap1_2d
- -7.995476671
- umap2_2d
- 1.282989048
- umap1_3d
- 0.220343067
- umap2_3d
- 4.51593386
- umap3_3d
- 1.113138858
- dataset
- EPN-CBTN
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- OXIDATIVE_PHOSPHORYLATION+0.510
- PROTEIN_SECRETION+0.500
- MYC_TARGETS_V1+0.290
- FATTY_ACID_METABOLISM+0.270
- ADIPOGENESIS+0.250
- ALLOGRAFT_REJECTION+0.240
- UNFOLDED_PROTEIN_RESPONSE+0.230
- MTORC1_SIGNALING+0.200
- DNA_REPAIR+0.140
- INTERFERON_GAMMA_RESPONSE+0.130
Top 10 suppressed
- WNT_BETA_CATENIN_SIGNALING-0.470
- HEDGEHOG_SIGNALING-0.320
- UV_RESPONSE_UP-0.320
- PANCREAS_BETA_CELLS-0.310
- ANGIOGENESIS-0.300
- APICAL_SURFACE-0.280
- KRAS_SIGNALING_DN-0.270
- TNFA_SIGNALING_VIA_NFKB-0.270
- HYPOXIA-0.190
- G2M_CHECKPOINT-0.170
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
7 twins match this tumor's tissue · 3 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | BS_WYERXS4G | Supratentorial Ependymoma | — | 0.897 |
| 2 | SJEPD030146_D1.RNA-Seq | EPN | Supratentorial EPN | 0.800 |
| 3 | MNG631 | — | — | 0.785 |
| 4 | BS_KVAJYZ6F | Glial-neuronal tumor NOS | — | 0.783 |
| 5 | MNG398 | — | — | 0.771 |
| 6 | MNG389 | — | — | 0.764 |
| 7 | MNG632 | — | — | 0.758 |
| 8 | MNG781 | — | — | 0.741 |
| 9 | SJEPD030930_D1.RNA-Seq | EPN | EPN Tumor | 0.739 |
| 10 | BS_CZ3NA7KV | Supratentorial Ependymoma | — | 0.718 |