F2FCC449-3487-474C-82A6-8F2ED71E41BC
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Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
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- cancer_type_detailed
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- subtype
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GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- OXIDATIVE_PHOSPHORYLATION+0.441
- PROTEIN_SECRETION+0.432
- DNA_REPAIR+0.319
- CHOLESTEROL_HOMEOSTASIS+0.312
- REACTIVE_OXYGEN_SPECIES_PATHWAY+0.278
- FATTY_ACID_METABOLISM+0.274
- MTORC1_SIGNALING+0.273
- ADIPOGENESIS+0.264
- HEME_METABOLISM+0.239
- UV_RESPONSE_UP+0.230
Top 10 suppressed
- ANGIOGENESIS-0.381
- IL6_JAK_STAT3_SIGNALING-0.354
- KRAS_SIGNALING_DN-0.310
- ALLOGRAFT_REJECTION-0.272
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.269
- PANCREAS_BETA_CELLS-0.253
- SPERMATOGENESIS-0.219
- COAGULATION-0.189
- TNFA_SIGNALING_VIA_NFKB-0.184
- INTERFERON_GAMMA_RESPONSE-0.180
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
7 twins match this tumor's tissue · 3 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | MNG1053 | — | — | 0.833 |
| 2 | A0DA6087-9D43-41F9-8569-9F9320E4A9E8 | — | — | 0.829 |
| 3 | 82956 | EPN | Supratentorial EPN | 0.828 |
| 4 | MNG434 | — | — | 0.824 |
| 5 | SJEPD030060_D1.RNA-Seq | EPN | EPN Tumor | 0.823 |
| 6 | MNG587 | — | — | 0.805 |
| 7 | EA6A086B-F655-47E8-9E70-8A2D36FC2AE1 | — | — | 0.802 |
| 8 | 56D3154E-E779-4C27-8305-FEE7310B6762 | — | — | 0.799 |
| 9 | SJEPD030784_D1.RNA-Seq | EPN | Myxopapillary EPN | 0.798 |
| 10 | C6096E12-D8A9-4B89-A9E4-4DA93E1FD861 | — | — | 0.796 |