BS_H4B5Y6S0
medulloblastoma
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- medulloblastoma
- cancer_type_detailed
- —
- subtype
- —
- cancer_type
- medulloblastoma
- overall_survival_months
- 108.80420499342969
- age_years
- 12.025
- sex
- Male
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- MYC_TARGETS_V1+0.444
- E2F_TARGETS+0.427
- DNA_REPAIR+0.314
- G2M_CHECKPOINT+0.313
- OXIDATIVE_PHOSPHORYLATION+0.307
- PANCREAS_BETA_CELLS+0.285
- PROTEIN_SECRETION+0.261
- SPERMATOGENESIS+0.244
- MYC_TARGETS_V2+0.202
- MITOTIC_SPINDLE+0.073
Top 10 suppressed
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.612
- INTERFERON_ALPHA_RESPONSE-0.607
- ANGIOGENESIS-0.585
- TNFA_SIGNALING_VIA_NFKB-0.585
- INFLAMMATORY_RESPONSE-0.550
- IL6_JAK_STAT3_SIGNALING-0.548
- INTERFERON_GAMMA_RESPONSE-0.545
- ALLOGRAFT_REJECTION-0.492
- COAGULATION-0.491
- COMPLEMENT-0.478
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | BS_Z7PKVY9J | medulloblastoma | — | 0.987 |
| 2 | BS_KYF0Q0E7 | medulloblastoma | — | 0.984 |
| 3 | BS_K74PZET7 | medulloblastoma | — | 0.981 |
| 4 | BS_DFWFBYSN | medulloblastoma | — | 0.979 |
| 5 | BS_HF3RNN2T | medulloblastoma | — | 0.978 |
| 6 | BS_J8G4SH4Z | medulloblastoma | — | 0.973 |
| 7 | BS_9M5XJ10G | medulloblastoma | — | 0.972 |
| 8 | BS_HKZENFDA | medulloblastoma | — | 0.968 |
| 9 | BS_GNV89A5P | medulloblastoma | — | 0.968 |
| 10 | BS_JFB984RG | medulloblastoma | — | 0.968 |