dd28c353-13f2-4e6a-a2d7-df94352e043f
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- ESTROGEN_RESPONSE_EARLY+0.300
- PROTEIN_SECRETION+0.300
- UV_RESPONSE_DN+0.300
- WNT_BETA_CATENIN_SIGNALING+0.300
- ANDROGEN_RESPONSE+0.200
- BILE_ACID_METABOLISM+0.200
- ESTROGEN_RESPONSE_LATE+0.200
- TGF_BETA_SIGNALING+0.200
- HEDGEHOG_SIGNALING+0.100
- ANGIOGENESIS+0.000
Top 10 suppressed
- ALLOGRAFT_REJECTION-0.500
- E2F_TARGETS-0.400
- IL6_JAK_STAT3_SIGNALING-0.400
- INFLAMMATORY_RESPONSE-0.400
- COMPLEMENT-0.300
- G2M_CHECKPOINT-0.300
- GLYCOLYSIS-0.300
- INTERFERON_GAMMA_RESPONSE-0.300
- IL2_STAT5_SIGNALING-0.200
- KRAS_SIGNALING_UP-0.200
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | 20030017.LumA | — | B | 0.859 |
| 2 | TCGA-A8-A09B-01A-11R-A00Z-07 | — | B | 0.816 |
| 3 | TCGA-E2-A1IL-01A-11R-A14D-07 | — | B | 0.795 |
| 4 | TCGA-BH-A0DO-01B-11R-A12D-07 | — | A | 0.794 |
| 5 | TCGA-D8-A27P-01A-11R-A16F-07 | — | B | 0.788 |
| 6 | TCGA-AN-A0XT-01A-11R-A109-07 | — | B | 0.783 |
| 7 | SRR25617895 | — | B | 0.783 |
| 8 | BSR_18_0092_S48 | — | A | 0.778 |
| 9 | 2bd0477f-40af-4969-9291-c05ab3d55268 | — | — | 0.776 |
| 10 | ULC0569T_S27 | — | cohortA1 | 0.776 |