c0054cf0-8f4b-47b6-a8fc-63a1fd36bcc7
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Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
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- cancer_type_detailed
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- subtype
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GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- APICAL_JUNCTION+0.400
- MYOGENESIS+0.400
- APICAL_SURFACE+0.300
- CHOLESTEROL_HOMEOSTASIS+0.300
- COAGULATION+0.300
- EPITHELIAL_MESENCHYMAL_TRANSITION+0.300
- ESTROGEN_RESPONSE_EARLY+0.300
- ESTROGEN_RESPONSE_LATE+0.300
- HEDGEHOG_SIGNALING+0.300
- KRAS_SIGNALING_DN+0.300
Top 10 suppressed
- MYC_TARGETS_V1-0.500
- PROTEIN_SECRETION-0.500
- ANDROGEN_RESPONSE-0.400
- G2M_CHECKPOINT-0.400
- E2F_TARGETS-0.300
- INTERFERON_ALPHA_RESPONSE-0.300
- INTERFERON_GAMMA_RESPONSE-0.300
- UV_RESPONSE_DN-0.300
- MITOTIC_SPINDLE-0.200
- MTORC1_SIGNALING-0.200
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | 44f9e45d-d779-4865-8f10-d085d5d25447 | — | — | 0.922 |
| 2 | a4322796-9189-48c2-9e7c-7b1493b5799a | — | — | 0.893 |
| 3 | 290b89f5-2a44-424b-b77d-a190dcb93e07 | — | — | 0.890 |
| 4 | 80bea63b-bc3a-4999-8c11-a35c92183cd7 | — | — | 0.881 |
| 5 | 399cd50c-1439-48a4-ba3b-a0782b2b7b62 | — | — | 0.878 |
| 6 | SAMN03290888 | — | — | 0.877 |
| 7 | a8235ad1-0c5f-4a0b-b595-85ef3a1e49ff | — | — | 0.872 |
| 8 | SAMN03290910 | — | — | 0.861 |
| 9 | 40b92a76-f324-4cdd-8209-517d021acd47 | — | — | 0.858 |
| 10 | 1e82995c-f318-4225-96d4-f1e98bcbf60b | — | — | 0.854 |
Per-pathway drug coverage
For each elevated pathway in this tumor, the best-reversing drug across the catalog. Uncovered pathways = unmet need at pathway level for this one patient.
0 of 23 elevated pathways have at least one drug that meaningfully reverses them.
| Pathway (elevated) | tumor score | Best drug | reversal magnitude |
|---|---|---|---|
| APICAL_JUNCTION | 0.400 | Inavolisib | — uncovered |
| MYOGENESIS | 0.400 | Inavolisib | — uncovered |
| APICAL_SURFACE | 0.300 | Temsirolimus | — uncovered |
| CHOLESTEROL_HOMEOSTASIS | 0.300 | Remibrutinib | — uncovered |
| COAGULATION | 0.300 | Binimetinib | — uncovered |
| EPITHELIAL_MESENCHYMAL_TRANSITION | 0.300 | Inavolisib | — uncovered |
| ESTROGEN_RESPONSE_EARLY | 0.300 | Inavolisib | — uncovered |
| ESTROGEN_RESPONSE_LATE | 0.300 | Idelalisib | — uncovered |
| HEDGEHOG_SIGNALING | 0.300 | Inavolisib | — uncovered |
| KRAS_SIGNALING_DN | 0.300 | Remibrutinib | — uncovered |
| UV_RESPONSE_UP | 0.300 | Idelalisib | — uncovered |
| WNT_BETA_CATENIN_SIGNALING | 0.300 | Inavolisib | — uncovered |
| XENOBIOTIC_METABOLISM | 0.300 | Inavolisib | — uncovered |
| ANGIOGENESIS | 0.200 | Remibrutinib | — uncovered |
| MYC_TARGETS_V2 | 0.200 | Idelalisib | — uncovered |
| NOTCH_SIGNALING | 0.200 | Inavolisib | — uncovered |
| REACTIVE_OXYGEN_SPECIES_PATHWAY | 0.200 | Inavolisib | — uncovered |
| ADIPOGENESIS | 0.100 | Inavolisib | — uncovered |
| BILE_ACID_METABOLISM | 0.100 | Inavolisib | — uncovered |
| FATTY_ACID_METABOLISM | 0.100 | Inavolisib | — uncovered |