SRR8518323
— · E
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- E
- subtype
- E
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- MYC_TARGETS_V2+0.690
- E2F_TARGETS+0.660
- MYC_TARGETS_V1+0.610
- G2M_CHECKPOINT+0.570
- INTERFERON_ALPHA_RESPONSE+0.480
- OXIDATIVE_PHOSPHORYLATION+0.380
- DNA_REPAIR+0.370
- MTORC1_SIGNALING+0.360
- INTERFERON_GAMMA_RESPONSE+0.340
- UNFOLDED_PROTEIN_RESPONSE+0.280
Top 10 suppressed
- UV_RESPONSE_DN-0.500
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.480
- ANGIOGENESIS-0.470
- HEDGEHOG_SIGNALING-0.450
- APICAL_SURFACE-0.380
- TGF_BETA_SIGNALING-0.380
- MYOGENESIS-0.370
- WNT_BETA_CATENIN_SIGNALING-0.370
- APICAL_JUNCTION-0.330
- NOTCH_SIGNALING-0.330
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | TCGA-AR-A0TU-01A-31R-A109-07 | — | E | 0.926 |
| 2 | SRR8518289 | — | E | 0.920 |
| 3 | TCGA-A2-A4S3-01A-21R-A266-07 | — | B | 0.919 |
| 4 | SRR8613729 | — | E | 0.913 |
| 5 | SRR8518297 | — | E | 0.908 |
| 6 | 20020093.Her2HRneg | — | E | 0.902 |
| 7 | TCGA-C8-A12U-01A-11R-A115-07 | — | B | 0.900 |
| 8 | TCGA-58-A46M-01A-11R-A24H-07 | — | cohortSQ2 | 0.896 |
| 9 | 58c2404d-b213-4a7f-a8fc-11081a88091b | — | — | 0.896 |
| 10 | SRR8518360 | — | E | 0.895 |