SRR10900593
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- PANCREAS_BETA_CELLS+0.400
- SPERMATOGENESIS+0.400
- KRAS_SIGNALING_DN+0.300
- BILE_ACID_METABOLISM+0.200
- COMPLEMENT+0.100
- ALLOGRAFT_REJECTION+0.000
- COAGULATION+0.000
- KRAS_SIGNALING_UP+0.000
- APICAL_SURFACE-0.100
- INFLAMMATORY_RESPONSE-0.100
Top 10 suppressed
- MYC_TARGETS_V2-0.500
- NOTCH_SIGNALING-0.500
- OXIDATIVE_PHOSPHORYLATION-0.500
- ADIPOGENESIS-0.400
- CHOLESTEROL_HOMEOSTASIS-0.400
- DNA_REPAIR-0.400
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.400
- GLYCOLYSIS-0.400
- MYC_TARGETS_V1-0.400
- P53_PATHWAY-0.400
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | ERR4976608 | — | D | 0.932 |
| 2 | SRR13311179 | — | — | 0.930 |
| 3 | SRR934779 | — | — | 0.928 |
| 4 | SRR8942981 | — | — | 0.925 |
| 5 | SRR12696761 | — | — | 0.923 |
| 6 | SRR934844 | — | — | 0.920 |
| 7 | SRR934856 | — | — | 0.919 |
| 8 | SRR26320083 | — | — | 0.918 |
| 9 | SRR33346946 | — | — | 0.914 |
| 10 | MNG597 | — | — | 0.913 |
Per-pathway drug coverage
For each elevated pathway in this tumor, the best-reversing drug across the catalog. Uncovered pathways = unmet need at pathway level for this one patient.
0 of 5 elevated pathways have at least one drug that meaningfully reverses them.
| Pathway (elevated) | tumor score | Best drug | reversal magnitude |
|---|---|---|---|
| PANCREAS_BETA_CELLS | 0.400 | Cobimetinib | — uncovered |
| SPERMATOGENESIS | 0.400 | Inavolisib | — uncovered |
| KRAS_SIGNALING_DN | 0.300 | Remibrutinib | — uncovered |
| BILE_ACID_METABOLISM | 0.200 | Inavolisib | — uncovered |
| COMPLEMENT | 0.100 | Inavolisib | — uncovered |