BSR_06_0173_A4_S51
— · A
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- A
- subtype
- A
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- WNT_BETA_CATENIN_SIGNALING+0.390
- MYOGENESIS+0.310
- UV_RESPONSE_DN+0.290
- HEDGEHOG_SIGNALING+0.180
- NOTCH_SIGNALING+0.180
- P53_PATHWAY+0.160
- BILE_ACID_METABOLISM+0.130
- APICAL_JUNCTION+0.120
- APICAL_SURFACE+0.060
- TGF_BETA_SIGNALING+0.050
Top 10 suppressed
- E2F_TARGETS-0.540
- INTERFERON_ALPHA_RESPONSE-0.530
- G2M_CHECKPOINT-0.510
- ALLOGRAFT_REJECTION-0.490
- MTORC1_SIGNALING-0.480
- INTERFERON_GAMMA_RESPONSE-0.460
- MYC_TARGETS_V1-0.430
- GLYCOLYSIS-0.410
- OXIDATIVE_PHOSPHORYLATION-0.370
- PROTEIN_SECRETION-0.350
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | BSR_10_0261_B3_S85 | — | A | 0.915 |
| 2 | SRR29022832 | — | A | 0.881 |
| 3 | SRR33532761 | — | A | 0.877 |
| 4 | SRR1313116 | — | A | 0.875 |
| 5 | MBCProject_0988_T3_RNA | — | A | 0.874 |
| 6 | BSR_17_0022_E1_S60 | — | A | 0.873 |
| 7 | TCGA-B6-A0RQ-01A-11R-A115-07 | — | A | 0.873 |
| 8 | TCGA-56-8624-01A-11R-2403-07 | — | cohortSQ1 | 0.871 |
| 9 | TCGA-D8-A4Z1-01A-21R-A266-07 | — | A | 0.868 |
| 10 | TCGA-55-8097-01A-11R-2241-07 | — | cohortA1 | 0.865 |