BS_TAHV8N04
Neurofibroma
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- Neurofibroma
- cancer_type_detailed
- —
- subtype
- —
- cancer_type
- Neurofibroma
- overall_survival_months
- 58.70565045992115
- age_years
- 17.381
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- INTERFERON_ALPHA_RESPONSE+0.507
- IL6_JAK_STAT3_SIGNALING+0.497
- INTERFERON_GAMMA_RESPONSE+0.491
- ALLOGRAFT_REJECTION+0.464
- EPITHELIAL_MESENCHYMAL_TRANSITION+0.463
- MYOGENESIS+0.447
- TNFA_SIGNALING_VIA_NFKB+0.421
- INFLAMMATORY_RESPONSE+0.403
- ANGIOGENESIS+0.398
- IL2_STAT5_SIGNALING+0.396
Top 10 suppressed
- E2F_TARGETS-0.510
- OXIDATIVE_PHOSPHORYLATION-0.471
- MTORC1_SIGNALING-0.424
- G2M_CHECKPOINT-0.422
- PANCREAS_BETA_CELLS-0.339
- MYC_TARGETS_V1-0.332
- DNA_REPAIR-0.301
- SPERMATOGENESIS-0.286
- MYC_TARGETS_V2-0.257
- PROTEIN_SECRETION-0.227
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
8 twins match this tumor's tissue · 2 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | BS_TQ5QHR17 | Neurofibroma | — | 0.948 |
| 2 | BS_69V8P8A0 | Neurofibroma | — | 0.947 |
| 3 | BS_0RF0EZTV | Neurofibroma | — | 0.943 |
| 4 | BS_FQX1PRAJ | Neurofibroma | — | 0.943 |
| 5 | BS_GDHH6T5A | Neurofibroma | — | 0.930 |
| 6 | BS_D4PJYHZ2 | Neurofibroma | — | 0.925 |
| 7 | BS_Z28VKGNS | Neurofibroma | — | 0.922 |
| 8 | MDT-AP-1128 | Med | Medulloblastoma | 0.915 |
| 9 | BS_NDC69214 | Neurofibroma | — | 0.914 |
| 10 | SRR1465632 | GTEX | — | 0.913 |