SRR26320073
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
- sex
- Male
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- MYC_TARGETS_V1+0.330
- MYC_TARGETS_V2+0.250
- OXIDATIVE_PHOSPHORYLATION+0.240
- ADIPOGENESIS+0.220
- G2M_CHECKPOINT+0.220
- PEROXISOME+0.220
- REACTIVE_OXYGEN_SPECIES_PATHWAY+0.200
- PI3K_AKT_MTOR_SIGNALING+0.170
- DNA_REPAIR+0.150
- E2F_TARGETS+0.150
Top 10 suppressed
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.490
- INFLAMMATORY_RESPONSE-0.420
- ALLOGRAFT_REJECTION-0.370
- ANGIOGENESIS-0.370
- IL2_STAT5_SIGNALING-0.360
- KRAS_SIGNALING_UP-0.350
- UV_RESPONSE_DN-0.350
- INTERFERON_ALPHA_RESPONSE-0.330
- INTERFERON_GAMMA_RESPONSE-0.330
- WNT_BETA_CATENIN_SIGNALING-0.330
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
9 twins match this tumor's tissue · 1 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | TCGA-CQ-6225-01A-11R-1915-07 | — | — | 0.901 |
| 2 | AUR-AG12-TTM1-A-1-1-R-A743-41 | — | C | 0.900 |
| 3 | f8d9864e-e148-4e60-9d9d-3df2897050cd | — | — | 0.893 |
| 4 | TCGA-A8-A06Q-01A-11R-A034-07 | — | C | 0.892 |
| 5 | 73370088-0b52-429b-957c-fd02d71f864d | — | — | 0.882 |
| 6 | TCGA-B6-A0X5-01A-21R-A109-07 | — | B | 0.882 |
| 7 | BS_NKEAAFMW | medulloblastoma | — | 0.878 |
| 8 | TCGA-QK-A6VB-01A-12R-A34R-07 | — | — | 0.878 |
| 9 | AUR-AERX-TTM1-A-1-1-R-A742-41 | — | C | 0.877 |
| 10 | SRR26320088 | — | — | 0.876 |