SRR8518141
— · E
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- E
- subtype
- E
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- MYC_TARGETS_V2+0.640
- E2F_TARGETS+0.440
- MYC_TARGETS_V1+0.440
- OXIDATIVE_PHOSPHORYLATION+0.330
- G2M_CHECKPOINT+0.280
- SPERMATOGENESIS+0.240
- INTERFERON_ALPHA_RESPONSE+0.230
- PANCREAS_BETA_CELLS+0.190
- REACTIVE_OXYGEN_SPECIES_PATHWAY+0.190
- MTORC1_SIGNALING+0.170
Top 10 suppressed
- TGF_BETA_SIGNALING-0.610
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.580
- UV_RESPONSE_DN-0.520
- ANGIOGENESIS-0.480
- HEDGEHOG_SIGNALING-0.420
- TNFA_SIGNALING_VIA_NFKB-0.390
- APICAL_JUNCTION-0.340
- APOPTOSIS-0.330
- COAGULATION-0.320
- KRAS_SIGNALING_UP-0.320
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | TCGA-GV-A6ZA-01A-12R-A33J-07 | — | — | 0.904 |
| 2 | SRR8518168 | — | E | 0.895 |
| 3 | fcfc55a0-35e6-4fae-a599-66af11ba856d | — | — | 0.892 |
| 4 | SRR8392889 | — | cohortMD1 | 0.892 |
| 5 | 504282dd-4fef-4f70-a709-6a545d00a263 | — | — | 0.890 |
| 6 | R175 | — | — | 0.878 |
| 7 | TCGA-P3-A6SW-01A-11R-A34R-07 | — | — | 0.877 |
| 8 | SRR8518323 | — | E | 0.875 |
| 9 | TCGA-66-2763-01A-01R-0851-07 | — | cohortSQ1 | 0.874 |
| 10 | 9da01737-be8f-4af5-9f8f-47bb892b6339 | — | — | 0.874 |