SRR1310136
GTEX
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- GTEX
- cancer_type_detailed
- —
- subtype
- —
- cancer_type
- GTEX
- sex
- Male
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- ANGIOGENESIS+0.413
- KRAS_SIGNALING_DN+0.370
- ESTROGEN_RESPONSE_EARLY+0.343
- PANCREAS_BETA_CELLS+0.335
- APICAL_SURFACE+0.318
- IL6_JAK_STAT3_SIGNALING+0.286
- UV_RESPONSE_DN+0.284
- TNFA_SIGNALING_VIA_NFKB+0.283
- INFLAMMATORY_RESPONSE+0.278
- HEDGEHOG_SIGNALING+0.270
Top 10 suppressed
- MYC_TARGETS_V1-0.593
- DNA_REPAIR-0.482
- PROTEIN_SECRETION-0.467
- OXIDATIVE_PHOSPHORYLATION-0.457
- MYC_TARGETS_V2-0.450
- E2F_TARGETS-0.400
- UNFOLDED_PROTEIN_RESPONSE-0.350
- NOTCH_SIGNALING-0.336
- ADIPOGENESIS-0.307
- G2M_CHECKPOINT-0.298
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SRR1336548 | GTEX | — | 0.933 |
| 2 | SRR604528 | GTEX | — | 0.932 |
| 3 | SRR1336292 | GTEX | — | 0.924 |
| 4 | SRR612563 | GTEX | — | 0.921 |
| 5 | SRR1315866 | GTEX | — | 0.916 |
| 6 | SRR602839 | GTEX | — | 0.911 |
| 7 | SRR1414424 | GTEX | — | 0.910 |
| 8 | SRR1085662 | GTEX | — | 0.909 |
| 9 | SRR1316392 | GTEX | — | 0.907 |
| 10 | SRR598638 | GTEX | — | 0.907 |