SRR817905
GTEX
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- GTEX
- cancer_type_detailed
- —
- subtype
- —
- cancer_type
- GTEX
- sex
- Male
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- KRAS_SIGNALING_DN+0.280
- OXIDATIVE_PHOSPHORYLATION+0.180
- FATTY_ACID_METABOLISM+0.166
- BILE_ACID_METABOLISM+0.149
- SPERMATOGENESIS+0.127
- UV_RESPONSE_DN+0.123
- PEROXISOME+0.120
- MYOGENESIS+0.105
- ESTROGEN_RESPONSE_EARLY+0.095
- ESTROGEN_RESPONSE_LATE+0.091
Top 10 suppressed
- E2F_TARGETS-0.471
- MYC_TARGETS_V1-0.468
- G2M_CHECKPOINT-0.455
- IL6_JAK_STAT3_SIGNALING-0.412
- MTORC1_SIGNALING-0.407
- ALLOGRAFT_REJECTION-0.400
- UNFOLDED_PROTEIN_RESPONSE-0.398
- MYC_TARGETS_V2-0.380
- TNFA_SIGNALING_VIA_NFKB-0.369
- DNA_REPAIR-0.336
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
10 twins match this tumor's tissue · 0 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | SRR818396 | GTEX | — | 0.966 |
| 2 | SRR608174 | GTEX | — | 0.936 |
| 3 | SRR816721 | GTEX | — | 0.929 |
| 4 | SRR1486626 | GTEX | — | 0.927 |
| 5 | SRR1366433 | GTEX | — | 0.917 |
| 6 | SRR1434934 | GTEX | — | 0.907 |
| 7 | SRR1442885 | GTEX | — | 0.905 |
| 8 | SRR1445347 | GTEX | — | 0.904 |
| 9 | SRR1076072 | GTEX | — | 0.901 |
| 10 | SRR598253 | GTEX | — | 0.900 |