TCGA-B6-A401-01A-11R-A239-07
— · B
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- B
- subtype
- B
- overall_survival_months
- 87
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- TNFA_SIGNALING_VIA_NFKB+0.360
- KRAS_SIGNALING_DN+0.290
- COAGULATION+0.270
- EPITHELIAL_MESENCHYMAL_TRANSITION+0.270
- ESTROGEN_RESPONSE_EARLY+0.270
- ESTROGEN_RESPONSE_LATE+0.270
- MYOGENESIS+0.270
- WNT_BETA_CATENIN_SIGNALING+0.200
- APICAL_JUNCTION+0.180
- HYPOXIA+0.170
Top 10 suppressed
- PROTEIN_SECRETION-0.540
- E2F_TARGETS-0.470
- G2M_CHECKPOINT-0.470
- MYC_TARGETS_V1-0.440
- ANDROGEN_RESPONSE-0.400
- TGF_BETA_SIGNALING-0.390
- PI3K_AKT_MTOR_SIGNALING-0.350
- MITOTIC_SPINDLE-0.330
- MTORC1_SIGNALING-0.330
- UV_RESPONSE_DN-0.310
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
8 twins match this tumor's tissue · 2 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | TCGA-LD-A66U-01A-11R-A31O-07 | — | B | 0.889 |
| 2 | SJEPD001517_D1.RNA-Seq | EPN | Posterior Fossa EPN | 0.885 |
| 3 | MNG1103 | — | — | 0.870 |
| 4 | SJEPD035_D.RNA-Seq | EPN | Posterior Fossa EPN | 0.863 |
| 5 | 22e9b9d1-ac71-43f5-8606-f9f53c6ecc08 | — | — | 0.861 |
| 6 | AUR-AER7-TTM4-A-1-1-R-A742-41 | — | E | 0.855 |
| 7 | SRR493947 | — | cohortA1 | 0.853 |
| 8 | R236 | — | — | 0.848 |
| 9 | TCGA-BH-A42U-01A-12R-A24H-07 | — | B | 0.846 |
| 10 | TCGA-A2-A3XW-01A-11R-A239-07 | — | B | 0.844 |