BS_G63HYD6N
Supratentorial Ependymoma
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- Supratentorial Ependymoma
- cancer_type_detailed
- —
- subtype
- —
- cancer_type
- Supratentorial Ependymoma
- overall_survival_months
- 69.80946123521682
- age_years
- 11.378
- sex
- Female
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- MYC_TARGETS_V1+0.369
- OXIDATIVE_PHOSPHORYLATION+0.362
- UNFOLDED_PROTEIN_RESPONSE+0.354
- PROTEIN_SECRETION+0.353
- DNA_REPAIR+0.351
- PANCREAS_BETA_CELLS+0.272
- WNT_BETA_CATENIN_SIGNALING+0.272
- UV_RESPONSE_UP+0.222
- PI3K_AKT_MTOR_SIGNALING+0.216
- ADIPOGENESIS+0.204
Top 10 suppressed
- IL6_JAK_STAT3_SIGNALING-0.459
- KRAS_SIGNALING_UP-0.407
- EPITHELIAL_MESENCHYMAL_TRANSITION-0.395
- ALLOGRAFT_REJECTION-0.384
- COMPLEMENT-0.378
- INFLAMMATORY_RESPONSE-0.362
- TNFA_SIGNALING_VIA_NFKB-0.341
- COAGULATION-0.321
- IL2_STAT5_SIGNALING-0.304
- APICAL_SURFACE-0.265
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
7 twins match this tumor's tissue · 3 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | BS_G63HYD6N | EPN | Supratentorial EPN | 0.938 |
| 2 | BS_7G42J2SK | Supratentorial Ependymoma | — | 0.852 |
| 3 | BS_FTKPQ5FZ | Supratentorial Ependymoma | — | 0.845 |
| 4 | BS_H4NXBD2D | Supratentorial Ependymoma | — | 0.840 |
| 5 | BS_QXKRN6CR | Supratentorial Ependymoma | — | 0.839 |
| 6 | BS_TJTEF70D | high-grade glioma | — | 0.834 |
| 7 | TCGA-DK-A3IS-01A-21R-A21D-07 | — | — | 0.832 |
| 8 | BS_QXKRN6CR | EPN | Supratentorial EPN | 0.817 |
| 9 | 004064de-0e10-491d-b3d8-bc628a8f70a8 | — | — | 0.812 |
| 10 | SRR12202462 | — | — | 0.812 |
Per-pathway drug coverage
For each elevated pathway in this tumor, the best-reversing drug across the catalog. Uncovered pathways = unmet need at pathway level for this one patient.
0 of 20 elevated pathways have at least one drug that meaningfully reverses them.
| Pathway (elevated) | tumor score | Best drug | reversal magnitude |
|---|---|---|---|
| MYC_TARGETS_V1 | 0.369 | Inavolisib | — uncovered |
| OXIDATIVE_PHOSPHORYLATION | 0.362 | Remibrutinib | — uncovered |
| UNFOLDED_PROTEIN_RESPONSE | 0.354 | Idelalisib | — uncovered |
| PROTEIN_SECRETION | 0.353 | Remibrutinib | — uncovered |
| DNA_REPAIR | 0.351 | Idelalisib | — uncovered |
| PANCREAS_BETA_CELLS | 0.272 | Cobimetinib | — uncovered |
| WNT_BETA_CATENIN_SIGNALING | 0.272 | Inavolisib | — uncovered |
| UV_RESPONSE_UP | 0.222 | Idelalisib | — uncovered |
| PI3K_AKT_MTOR_SIGNALING | 0.216 | Inavolisib | — uncovered |
| ADIPOGENESIS | 0.204 | Inavolisib | — uncovered |
| E2F_TARGETS | 0.198 | Inavolisib | — uncovered |
| NOTCH_SIGNALING | 0.186 | Inavolisib | — uncovered |
| MTORC1_SIGNALING | 0.183 | Inavolisib | — uncovered |
| G2M_CHECKPOINT | 0.159 | Inavolisib | — uncovered |
| SPERMATOGENESIS | 0.115 | Inavolisib | — uncovered |
| GLYCOLYSIS | 0.086 | Inavolisib | — uncovered |
| REACTIVE_OXYGEN_SPECIES_PATHWAY | 0.054 | Inavolisib | — uncovered |
| CHOLESTEROL_HOMEOSTASIS | 0.049 | Remibrutinib | — uncovered |
| INTERFERON_ALPHA_RESPONSE | 0.035 | Inavolisib | — uncovered |
| TGF_BETA_SIGNALING | 0.017 | Inavolisib | — uncovered |