TCGA-K4-A54R-01A-11R-A26T-07
—
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- —
- cancer_type_detailed
- —
- subtype
- —
- overall_survival_months
- 27.6609724
- os_event
- false
- sex
- Male
GSVA pathway preview (50 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Top 10 elevated
- INTERFERON_ALPHA_RESPONSE+0.610
- INTERFERON_GAMMA_RESPONSE+0.540
- E2F_TARGETS+0.460
- MYC_TARGETS_V1+0.450
- ALLOGRAFT_REJECTION+0.430
- UNFOLDED_PROTEIN_RESPONSE+0.410
- G2M_CHECKPOINT+0.370
- EPITHELIAL_MESENCHYMAL_TRANSITION+0.350
- MTORC1_SIGNALING+0.330
- MYC_TARGETS_V2+0.330
Top 10 suppressed
- HEDGEHOG_SIGNALING-0.280
- WNT_BETA_CATENIN_SIGNALING-0.180
- KRAS_SIGNALING_DN-0.170
- PANCREAS_BETA_CELLS-0.170
- NOTCH_SIGNALING-0.110
- UV_RESPONSE_DN-0.080
- BILE_ACID_METABOLISM-0.060
- KRAS_SIGNALING_UP-0.020
- ESTROGEN_RESPONSE_EARLY+0.010
- GLYCOLYSIS+0.070
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
8 twins match this tumor's tissue · 2 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | 53018DE1-9557-4181-A0F2-5200013F1CEA | — | — | 0.908 |
| 2 | SRR6013600 | — | cohortA1 | 0.906 |
| 3 | B9535625-504A-4FCD-B341-2985AE72508A | — | — | 0.905 |
| 4 | SRR13311163 | — | — | 0.903 |
| 5 | D06FFD0C-80D4-413D-9C83-62D9C163EDAB | — | — | 0.899 |
| 6 | C3F0BD22-6891-44F0-B023-02FC6EDFA7EB | — | — | 0.898 |
| 7 | BS_X59HSFGG | low-grade glioma | — | 0.894 |
| 8 | 8B4E465B-0FD5-4154-824B-1E6B2656FD2F | — | — | 0.889 |
| 9 | MDT-AP-0368 | Med | Medulloblastoma | 0.888 |
| 10 | SRR1516056 | — | — | 0.888 |