SJEPD001515_D1.RNA-Seq
EPN · Posterior Fossa EPN
Clinical attributes
From the source cohort, normalized into canonical keys plus the project's native columns.
- cancer_type
- EPN
- cancer_type_detailed
- —
- subtype
- Posterior Fossa EPN
- cancer_type
- EPN
- subtype
- Posterior Fossa EPN
- age_years
- 1.3
- e1_e2
- E2
- umap1_2d
- -6.388306891
- umap2_2d
- -0.801811651
- umap1_3d
- 1.25800336
- umap2_3d
- 3.033663564
- umap3_3d
- 0.408165841
- dataset
- EPN-StJude
GSVA pathway preview (0 Hallmark scores)
Top 10 most elevated and top 10 most suppressed Hallmark pathways for this sample.
Patient twins — nearest pathway neighbors
10 samples closest to this one in 50-dim pathway space, drawn from the Pathway Atlas. Cosine similarity = 1 means identical pathway state.
6 twins match this tumor's tissue · 4 come from a different tissue of origin
| # | Sample | Cancer type | Subtype | cos similarity |
|---|---|---|---|---|
| 1 | BS_CVGFNCBJ | low-grade glioma | — | 0.887 |
| 2 | SJEPD001527_R1.RNA-Seq | EPN | Posterior Fossa EPN | 0.862 |
| 3 | 60c210ff-d245-40d2-9de9-7b799cc3ffc9 | — | — | 0.859 |
| 4 | SJEPD025_D.RNA-Seq | EPN | Posterior Fossa EPN | 0.853 |
| 5 | SJEPD028_D.RNA-Seq | EPN | Posterior Fossa EPN | 0.852 |
| 6 | ERR2208930 | — | — | 0.847 |
| 7 | SRR654874 | GTEX | — | 0.844 |
| 8 | SRR4296108 | — | cohortA1 | 0.840 |
| 9 | BS_AKRHBPNZ | Ganglioglioma | — | 0.832 |
| 10 | BS_ET8CJXSF | pilocytic astrocytoma | — | 0.832 |